Detailed information
Bioinformatically predicted
Overview
| Name | ssbB/cilA | Type | Machinery gene |
| Locus tag | ACD269_RS09140 | Genome accession | NZ_CP168260 |
| Coordinates | 1780388..1780783 (-) | Length | 131 a.a. |
| NCBI ID | WP_000282467.1 | Uniprot ID | A0A098Z0L0 |
| Organism | Streptococcus pneumoniae strain FC2 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1775388..1785783
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACD269_RS09115 (ACD269_09115) | recX | 1775465..1776241 (+) | 777 | WP_000705089.1 | recombination regulator RecX | - |
| ACD269_RS09120 (ACD269_09120) | - | 1776330..1776863 (+) | 534 | WP_000775321.1 | DUF402 domain-containing protein | - |
| ACD269_RS09125 (ACD269_09125) | - | 1777303..1778058 (-) | 756 | Protein_1785 | epoxyqueuosine reductase QueH | - |
| ACD269_RS09130 (ACD269_09130) | groL | 1778196..1779818 (-) | 1623 | WP_000031573.1 | chaperonin GroEL | - |
| ACD269_RS09135 (ACD269_09135) | groES | 1779834..1780118 (-) | 285 | WP_000917330.1 | co-chaperone GroES | - |
| ACD269_RS09140 (ACD269_09140) | ssbB/cilA | 1780388..1780783 (-) | 396 | WP_000282467.1 | single-stranded DNA-binding protein | Machinery gene |
| ACD269_RS09145 (ACD269_09145) | - | 1780861..1781622 (-) | 762 | WP_373380528.1 | SDR family NAD(P)-dependent oxidoreductase | - |
| ACD269_RS09150 (ACD269_09150) | ytpR | 1781655..1782281 (-) | 627 | WP_000578309.1 | YtpR family tRNA-binding protein | - |
| ACD269_RS09155 (ACD269_09155) | - | 1782297..1782614 (-) | 318 | WP_000615767.1 | thioredoxin family protein | - |
| ACD269_RS09160 (ACD269_09160) | - | 1782611..1782910 (-) | 300 | WP_001013974.1 | DUF4651 domain-containing protein | - |
| ACD269_RS09165 (ACD269_09165) | - | 1783108..1783170 (-) | 63 | WP_219300018.1 | hypothetical protein | - |
| ACD269_RS09170 (ACD269_09170) | - | 1783195..1783386 (-) | 192 | WP_000291826.1 | cell wall-binding protein | - |
| ACD269_RS09175 (ACD269_09175) | - | 1783547..1784221 (-) | 675 | WP_000725719.1 | hypothetical protein | - |
| ACD269_RS09180 (ACD269_09180) | - | 1784226..1784672 (-) | 447 | WP_000776596.1 | LytTR family DNA-binding domain-containing protein | - |
| ACD269_RS09185 (ACD269_09185) | - | 1784786..1785289 (-) | 504 | WP_000800945.1 | phosphatase PAP2 family protein | - |
| ACD269_RS09190 (ACD269_09190) | - | 1785286..1785648 (-) | 363 | WP_000078805.1 | DUF2200 domain-containing protein | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 14925.89 Da Isoelectric Point: 5.9409
>NTDB_id=1043515 ACD269_RS09140 WP_000282467.1 1780388..1780783(-) (ssbB/cilA) [Streptococcus pneumoniae strain FC2]
MYNKVIMIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREADFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF
MYNKVIMIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREADFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF
Nucleotide
Download Length: 396 bp
>NTDB_id=1043515 ACD269_RS09140 WP_000282467.1 1780388..1780783(-) (ssbB/cilA) [Streptococcus pneumoniae strain FC2]
ATGTATAATAAAGTTATCATGATTGGGCGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCGGTAGC
GCGAGCAACTATCGCTGTCAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGCTGATTTTGTTAATATGGTTCTAT
GGGGCAGACTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGTCAGATGAATTATGTAACCGAAGTCCTTGTGACAGGATTCCAACTCTTGGAAAGTCGTGCCCA
ACGTGCTATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTGGTCTTGGAAGAGGAAGAATTGCCATTTTAA
ATGTATAATAAAGTTATCATGATTGGGCGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCGGTAGC
GCGAGCAACTATCGCTGTCAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGCTGATTTTGTTAATATGGTTCTAT
GGGGCAGACTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGTCAGATGAATTATGTAACCGAAGTCCTTGTGACAGGATTCCAACTCTTGGAAAGTCGTGCCCA
ACGTGCTATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTGGTCTTGGAAGAGGAAGAATTGCCATTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbB/cilA | Streptococcus pneumoniae D39 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
99.237 |
100 |
0.992 |
| ssbB/cilA | Streptococcus mitis SK321 |
98.473 |
100 |
0.985 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
98.473 |
100 |
0.985 |
| ssbA | Streptococcus mutans UA159 |
74.809 |
100 |
0.748 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
70.229 |
100 |
0.702 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
59.821 |
85.496 |
0.511 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
50.943 |
80.916 |
0.412 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
46.903 |
86.26 |
0.405 |