Detailed information
Bioinformatically predicted
Overview
| Name | comE1/comEA | Type | Machinery gene |
| Locus tag | AB8599_RS10870 | Genome accession | NZ_CP166194 |
| Coordinates | 2479764..2480051 (-) | Length | 95 a.a. |
| NCBI ID | WP_407330922.1 | Uniprot ID | - |
| Organism | Enterovibrio sp. 27052020O | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2474764..2485051
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB8599_RS10845 (AB8599_10850) | - | 2474867..2476081 (+) | 1215 | WP_407330917.1 | pyridoxal phosphate-dependent aminotransferase | - |
| AB8599_RS10850 (AB8599_10855) | rrtA | 2476151..2476726 (-) | 576 | WP_407330918.1 | rhombosortase | - |
| AB8599_RS10855 (AB8599_10860) | - | 2476776..2477402 (+) | 627 | WP_407330919.1 | tRNA-uridine aminocarboxypropyltransferase | - |
| AB8599_RS10860 (AB8599_10865) | - | 2477588..2478943 (-) | 1356 | WP_407330920.1 | anti-phage deoxyguanosine triphosphatase | - |
| AB8599_RS10865 (AB8599_10870) | yfbR | 2478936..2479532 (-) | 597 | WP_407330921.1 | 5'-deoxynucleotidase | - |
| AB8599_RS10870 (AB8599_10875) | comE1/comEA | 2479764..2480051 (-) | 288 | WP_407330922.1 | ComEA family DNA-binding protein | Machinery gene |
| AB8599_RS10875 (AB8599_10880) | ppiD | 2480214..2482103 (-) | 1890 | WP_407330923.1 | peptidylprolyl isomerase | - |
| AB8599_RS10880 (AB8599_10885) | hupB | 2482311..2482583 (-) | 273 | WP_017004308.1 | nucleoid-associated protein HU-beta | - |
Sequence
Protein
Download Length: 95 a.a. Molecular weight: 10098.50 Da Isoelectric Point: 4.5557
>NTDB_id=1033633 AB8599_RS10870 WP_407330922.1 2479764..2480051(-) (comE1/comEA) [Enterovibrio sp. 27052020O]
MIKTLFSAFLLAATLIVSPFATAQDGAQGAPIEVNINTAEAEELDKYLDGIGKSKAQAIVDFRNENGAFESVDALSSVKG
IGKAIVEKNRDRITL
MIKTLFSAFLLAATLIVSPFATAQDGAQGAPIEVNINTAEAEELDKYLDGIGKSKAQAIVDFRNENGAFESVDALSSVKG
IGKAIVEKNRDRITL
Nucleotide
Download Length: 288 bp
>NTDB_id=1033633 AB8599_RS10870 WP_407330922.1 2479764..2480051(-) (comE1/comEA) [Enterovibrio sp. 27052020O]
ATGATAAAAACACTCTTTTCAGCATTTTTACTGGCGGCAACGCTCATAGTCAGCCCTTTTGCGACAGCGCAAGATGGGGC
TCAGGGCGCACCAATTGAAGTGAACATCAACACGGCGGAAGCCGAAGAGCTGGATAAGTATCTGGACGGCATTGGAAAAT
CAAAAGCGCAGGCCATTGTTGATTTTCGCAACGAAAACGGTGCTTTCGAATCGGTCGACGCTCTCTCTAGTGTCAAAGGT
ATCGGCAAAGCCATCGTTGAGAAAAACCGCGATCGTATTACCTTATAA
ATGATAAAAACACTCTTTTCAGCATTTTTACTGGCGGCAACGCTCATAGTCAGCCCTTTTGCGACAGCGCAAGATGGGGC
TCAGGGCGCACCAATTGAAGTGAACATCAACACGGCGGAAGCCGAAGAGCTGGATAAGTATCTGGACGGCATTGGAAAAT
CAAAAGCGCAGGCCATTGTTGATTTTCGCAACGAAAACGGTGCTTTCGAATCGGTCGACGCTCTCTCTAGTGTCAAAGGT
ATCGGCAAAGCCATCGTTGAGAAAAACCGCGATCGTATTACCTTATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comE1/comEA | Haemophilus influenzae Rd KW20 |
45.455 |
100 |
0.526 |
| comEA | Vibrio cholerae C6706 |
48.515 |
100 |
0.516 |
| comEA | Vibrio cholerae strain A1552 |
48.515 |
100 |
0.516 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
47.826 |
96.842 |
0.463 |
| comEA | Vibrio campbellii strain DS40M4 |
44.211 |
100 |
0.442 |
| comE | Neisseria gonorrhoeae MS11 |
41.935 |
97.895 |
0.411 |
| comE | Neisseria gonorrhoeae MS11 |
41.935 |
97.895 |
0.411 |
| comE | Neisseria gonorrhoeae MS11 |
41.935 |
97.895 |
0.411 |
| comE | Neisseria gonorrhoeae MS11 |
41.935 |
97.895 |
0.411 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
58.065 |
65.263 |
0.379 |
| comEA | Legionella pneumophila str. Paris |
36 |
100 |
0.379 |
| comEA | Legionella pneumophila strain ERS1305867 |
36 |
100 |
0.379 |
| comEA | Acinetobacter baylyi ADP1 |
52.239 |
70.526 |
0.368 |