Detailed information
Bioinformatically predicted
Overview
| Name | ssbB/cilA | Type | Machinery gene |
| Locus tag | AB6M97_RS00910 | Genome accession | NZ_CP163514 |
| Coordinates | 163407..163802 (+) | Length | 131 a.a. |
| NCBI ID | WP_369350953.1 | Uniprot ID | - |
| Organism | Streptococcus hillyeri strain S23-3001-1 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 158407..168802
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB6M97_RS00885 (AB6M97_00885) | - | 158912..159373 (+) | 462 | WP_121835811.1 | ECF transporter S component | - |
| AB6M97_RS00890 (AB6M97_00890) | - | 159465..160028 (+) | 564 | WP_121835810.1 | TIGR01440 family protein | - |
| AB6M97_RS00895 (AB6M97_00895) | - | 160331..161161 (-) | 831 | WP_121835809.1 | mechanosensitive ion channel family protein | - |
| AB6M97_RS00900 (AB6M97_00900) | tig | 161257..162540 (+) | 1284 | WP_121835808.1 | trigger factor | - |
| AB6M97_RS00905 (AB6M97_00905) | - | 162617..163333 (-) | 717 | WP_369350952.1 | class I SAM-dependent methyltransferase | - |
| AB6M97_RS00910 (AB6M97_00910) | ssbB/cilA | 163407..163802 (+) | 396 | WP_369350953.1 | single-stranded DNA-binding protein | Machinery gene |
| AB6M97_RS00915 (AB6M97_00915) | pflB | 163876..166203 (-) | 2328 | WP_121835805.1 | formate C-acetyltransferase | - |
| AB6M97_RS00920 (AB6M97_00920) | dinB | 166434..167528 (+) | 1095 | WP_121835804.1 | DNA polymerase IV | - |
| AB6M97_RS00925 (AB6M97_00925) | - | 167646..168125 (-) | 480 | WP_121835803.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 14771.74 Da Isoelectric Point: 6.4845
>NTDB_id=1030332 AB6M97_RS00910 WP_369350953.1 163407..163802(+) (ssbB/cilA) [Streptococcus hillyeri strain S23-3001-1]
MYNKVIMIGRLTSNPEMVKTATDKAVSRVTIAVNRRYKSSSGEREADFVQVVFWGRLAETLASYASKGSLVSIDGELRTR
QYEKAGQKHYVTEVLGHGFQLLESRAQRAMRESNVADELADLVLEEEELPF
MYNKVIMIGRLTSNPEMVKTATDKAVSRVTIAVNRRYKSSSGEREADFVQVVFWGRLAETLASYASKGSLVSIDGELRTR
QYEKAGQKHYVTEVLGHGFQLLESRAQRAMRESNVADELADLVLEEEELPF
Nucleotide
Download Length: 396 bp
>NTDB_id=1030332 AB6M97_RS00910 WP_369350953.1 163407..163802(+) (ssbB/cilA) [Streptococcus hillyeri strain S23-3001-1]
ATGTACAATAAAGTGATTATGATTGGGCGTTTAACGTCCAATCCTGAAATGGTTAAGACTGCCACAGATAAAGCTGTTTC
TCGAGTAACTATTGCGGTTAATCGCCGTTATAAGTCTAGTTCTGGTGAACGTGAAGCAGACTTTGTCCAAGTTGTTTTCT
GGGGACGCCTAGCAGAAACACTTGCAAGTTATGCGTCAAAAGGTAGCCTCGTTTCCATAGATGGTGAGTTGCGGACTCGT
CAGTATGAAAAAGCAGGGCAGAAACACTATGTGACTGAAGTGTTAGGTCATGGATTCCAGTTGCTAGAAAGCCGTGCCCA
ACGTGCCATGCGAGAAAGTAATGTAGCGGATGAATTGGCTGATTTGGTCTTAGAAGAAGAGGAATTGCCATTTTAA
ATGTACAATAAAGTGATTATGATTGGGCGTTTAACGTCCAATCCTGAAATGGTTAAGACTGCCACAGATAAAGCTGTTTC
TCGAGTAACTATTGCGGTTAATCGCCGTTATAAGTCTAGTTCTGGTGAACGTGAAGCAGACTTTGTCCAAGTTGTTTTCT
GGGGACGCCTAGCAGAAACACTTGCAAGTTATGCGTCAAAAGGTAGCCTCGTTTCCATAGATGGTGAGTTGCGGACTCGT
CAGTATGAAAAAGCAGGGCAGAAACACTATGTGACTGAAGTGTTAGGTCATGGATTCCAGTTGCTAGAAAGCCGTGCCCA
ACGTGCCATGCGAGAAAGTAATGTAGCGGATGAATTGGCTGATTTGGTCTTAGAAGAAGAGGAATTGCCATTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
77.863 |
100 |
0.779 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
77.863 |
100 |
0.779 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
77.863 |
100 |
0.779 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
77.099 |
100 |
0.771 |
| ssbA | Streptococcus mutans UA159 |
76.336 |
100 |
0.763 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
76.336 |
100 |
0.763 |
| ssbB/cilA | Streptococcus mitis SK321 |
76.336 |
100 |
0.763 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
72.519 |
100 |
0.725 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
59.649 |
87.023 |
0.519 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
43.697 |
90.84 |
0.397 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
48.113 |
80.916 |
0.389 |