Detailed information
Bioinformatically predicted
Overview
| Name | ssbB | Type | Machinery gene |
| Locus tag | AB3Z07_RS24865 | Genome accession | NZ_CP162630 |
| Coordinates | 5040903..5041250 (-) | Length | 115 a.a. |
| NCBI ID | WP_026563160.1 | Uniprot ID | - |
| Organism | Metabacillus halosaccharovorans strain Hao 2024 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 5035903..5046250
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB3Z07_RS24855 (AB3Z07_24855) | - | 5037506..5040271 (+) | 2766 | WP_368658085.1 | DEAD/DEAH box helicase | - |
| AB3Z07_RS24860 (AB3Z07_24860) | - | 5040417..5040755 (-) | 339 | WP_368658086.1 | hypothetical protein | - |
| AB3Z07_RS24865 (AB3Z07_24865) | ssbB | 5040903..5041250 (-) | 348 | WP_026563160.1 | single-stranded DNA-binding protein | Machinery gene |
| AB3Z07_RS24870 (AB3Z07_24870) | sleB | 5041565..5042296 (+) | 732 | WP_368658087.1 | spore cortex-lytic enzyme | - |
| AB3Z07_RS24875 (AB3Z07_24875) | - | 5042370..5043287 (-) | 918 | WP_368658088.1 | patatin-like phospholipase family protein | - |
| AB3Z07_RS24880 (AB3Z07_24880) | - | 5043773..5044675 (-) | 903 | WP_368658089.1 | AEC family transporter | - |
| AB3Z07_RS24885 (AB3Z07_24885) | - | 5044715..5046145 (-) | 1431 | WP_368658090.1 | aldehyde dehydrogenase family protein | - |
Sequence
Protein
Download Length: 115 a.a. Molecular weight: 12884.54 Da Isoelectric Point: 8.4827
>NTDB_id=1027693 AB3Z07_RS24865 WP_026563160.1 5040903..5041250(-) (ssbB) [Metabacillus halosaccharovorans strain Hao 2024]
MINQIILVGRLTKDPEIRYTADGAPVANITLAVSRNFKNAAGEIETDFVNCTVWRRTAENTANYCRKGSVVGVTGRIQTR
SYENAERNRVYVTEVVADSVRFMSGKPRELVEQES
MINQIILVGRLTKDPEIRYTADGAPVANITLAVSRNFKNAAGEIETDFVNCTVWRRTAENTANYCRKGSVVGVTGRIQTR
SYENAERNRVYVTEVVADSVRFMSGKPRELVEQES
Nucleotide
Download Length: 348 bp
>NTDB_id=1027693 AB3Z07_RS24865 WP_026563160.1 5040903..5041250(-) (ssbB) [Metabacillus halosaccharovorans strain Hao 2024]
GTGATTAATCAAATAATCTTAGTCGGTCGTCTGACAAAGGATCCGGAAATTCGGTATACCGCGGATGGTGCCCCGGTCGC
CAATATTACTCTCGCGGTAAGCCGGAACTTTAAAAATGCAGCTGGAGAAATTGAAACAGATTTCGTCAATTGCACGGTTT
GGCGACGAACAGCTGAGAACACGGCAAATTATTGCCGAAAAGGCTCAGTCGTAGGTGTGACAGGCCGCATCCAAACGCGC
AGCTATGAAAATGCTGAACGCAACCGCGTGTACGTAACAGAAGTAGTGGCAGATTCAGTCCGCTTTATGAGCGGTAAGCC
GCGTGAATTAGTTGAGCAGGAAAGTTAA
GTGATTAATCAAATAATCTTAGTCGGTCGTCTGACAAAGGATCCGGAAATTCGGTATACCGCGGATGGTGCCCCGGTCGC
CAATATTACTCTCGCGGTAAGCCGGAACTTTAAAAATGCAGCTGGAGAAATTGAAACAGATTTCGTCAATTGCACGGTTT
GGCGACGAACAGCTGAGAACACGGCAAATTATTGCCGAAAAGGCTCAGTCGTAGGTGTGACAGGCCGCATCCAAACGCGC
AGCTATGAAAATGCTGAACGCAACCGCGTGTACGTAACAGAAGTAGTGGCAGATTCAGTCCGCTTTATGAGCGGTAAGCC
GCGTGAATTAGTTGAGCAGGAAAGTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
73.394 |
94.783 |
0.696 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
61.321 |
92.174 |
0.565 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
53.982 |
98.261 |
0.53 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
42.593 |
93.913 |
0.4 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
42.202 |
94.783 |
0.4 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
41.284 |
94.783 |
0.391 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
41.284 |
94.783 |
0.391 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
41.284 |
94.783 |
0.391 |
| ssbB/cilA | Streptococcus mitis SK321 |
41.284 |
94.783 |
0.391 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
40.367 |
94.783 |
0.383 |
| ssbA | Streptococcus mutans UA159 |
39.815 |
93.913 |
0.374 |