Detailed information
Bioinformatically predicted
Overview
| Name | comGC | Type | Machinery gene |
| Locus tag | AB3450_RS08755 | Genome accession | NZ_CP162449 |
| Coordinates | 1748459..1748770 (+) | Length | 103 a.a. |
| NCBI ID | WP_000472256.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain TUM20967 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1743459..1753770
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB3450_RS08725 (AB3450_08725) | - | 1744242..1744445 (+) | 204 | WP_000087561.1 | YqgQ family protein | - |
| AB3450_RS08730 (AB3450_08730) | - | 1744442..1745428 (+) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| AB3450_RS08735 (AB3450_08735) | - | 1745428..1745757 (+) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| AB3450_RS08740 (AB3450_08740) | - | 1745754..1746377 (+) | 624 | WP_001223010.1 | MBL fold metallo-hydrolase | - |
| AB3450_RS08745 (AB3450_08745) | comGA | 1746429..1747403 (+) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| AB3450_RS08750 (AB3450_08750) | comGB | 1747375..1748445 (+) | 1071 | WP_000776422.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| AB3450_RS08755 (AB3450_08755) | comGC | 1748459..1748770 (+) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| AB3450_RS08760 (AB3450_08760) | comGD | 1748748..1749194 (+) | 447 | WP_001788899.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| AB3450_RS08765 (AB3450_08765) | comGE | 1749181..1749480 (+) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| AB3450_RS08770 (AB3450_08770) | comGF | 1749398..1749895 (+) | 498 | WP_001789864.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| AB3450_RS08775 (AB3450_08775) | - | 1749992..1750138 (+) | 147 | WP_001789879.1 | hypothetical protein | - |
| AB3450_RS08780 (AB3450_08780) | - | 1750128..1750652 (+) | 525 | WP_001015121.1 | shikimate kinase | - |
| AB3450_RS08785 (AB3450_08785) | gcvT | 1750811..1751902 (+) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| AB3450_RS08790 (AB3450_08790) | gcvPA | 1751922..1753268 (+) | 1347 | WP_368410236.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 103 a.a. Molecular weight: 11315.36 Da Isoelectric Point: 8.5268
>NTDB_id=1025822 AB3450_RS08755 WP_000472256.1 1748459..1748770(+) (comGC) [Staphylococcus aureus strain TUM20967]
MFKFLKKTQAFTLIEMLLVLLIISLLLILIIPNIAKQTAHIQSTGCNAQVKMVNSQIEAYALKHNRNPSSIEDLIADGFI
KEAQKTCKSGETITISNGEAVAN
MFKFLKKTQAFTLIEMLLVLLIISLLLILIIPNIAKQTAHIQSTGCNAQVKMVNSQIEAYALKHNRNPSSIEDLIADGFI
KEAQKTCKSGETITISNGEAVAN
Nucleotide
Download Length: 312 bp
>NTDB_id=1025822 AB3450_RS08755 WP_000472256.1 1748459..1748770(+) (comGC) [Staphylococcus aureus strain TUM20967]
ATGTTTAAATTTCTTAAGAAAACTCAAGCGTTTACATTGATAGAGATGCTATTAGTGTTATTAATCATCAGTTTATTATT
AATTTTAATCATTCCAAATATTGCTAAACAAACTGCTCACATACAATCAACAGGTTGTAATGCACAGGTAAAAATGGTTA
ATAGTCAAATTGAAGCGTATGCATTGAAACATAATAGAAATCCATCGTCTATTGAAGACTTAATTGCAGATGGTTTTATA
AAAGAAGCACAAAAGACATGTAAATCAGGAGAGACAATCACAATTAGTAATGGAGAAGCAGTTGCAAATTAG
ATGTTTAAATTTCTTAAGAAAACTCAAGCGTTTACATTGATAGAGATGCTATTAGTGTTATTAATCATCAGTTTATTATT
AATTTTAATCATTCCAAATATTGCTAAACAAACTGCTCACATACAATCAACAGGTTGTAATGCACAGGTAAAAATGGTTA
ATAGTCAAATTGAAGCGTATGCATTGAAACATAATAGAAATCCATCGTCTATTGAAGACTTAATTGCAGATGGTTTTATA
AAAGAAGCACAAAAGACATGTAAATCAGGAGAGACAATCACAATTAGTAATGGAGAAGCAGTTGCAAATTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC | Staphylococcus aureus MW2 |
100 |
100 |
1 |
| comGC | Staphylococcus aureus N315 |
100 |
100 |
1 |
| comGC/cglC | Streptococcus pneumoniae TIGR4 |
46.078 |
99.029 |
0.456 |
| comGC/cglC | Streptococcus pneumoniae Rx1 |
46.078 |
99.029 |
0.456 |
| comGC/cglC | Streptococcus pneumoniae D39 |
46.078 |
99.029 |
0.456 |
| comGC/cglC | Streptococcus pneumoniae R6 |
46.078 |
99.029 |
0.456 |
| comGC/cglC | Streptococcus mitis SK321 |
51.163 |
83.495 |
0.427 |
| comGC/cglC | Streptococcus mitis NCTC 12261 |
51.163 |
83.495 |
0.427 |
| comYC | Streptococcus gordonii str. Challis substr. CH1 |
42.857 |
95.146 |
0.408 |
| comYC | Streptococcus suis isolate S10 |
50 |
75.728 |
0.379 |
| comGC | Bacillus subtilis subsp. subtilis str. 168 |
41.758 |
88.35 |
0.369 |
| comGC | Lactococcus lactis subsp. cremoris KW2 |
46.341 |
79.612 |
0.369 |