Detailed information NTG1025825

Bioinformatically predicted

Overview

• Name: comGF
• Type: Machinery gene
• Locus tag: AB3450_RS08770
• Genome accession: NZ_CP162449
• Coordinates: 1749398..1749895 (+)
• Length: 165 a.a.
• NCBI ID: WP_001789864.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain TUM20967
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1744398..1754895

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB3450_RS08730 (AB3450_08730)	-	1744442..1745428 (+)	987	WP_000161314.1	ROK family glucokinase	-
AB3450_RS08735 (AB3450_08735)	-	1745428..1745757 (+)	330	WP_001018871.1	MTH1187 family thiamine-binding protein	-
AB3450_RS08740 (AB3450_08740)	-	1745754..1746377 (+)	624	WP_001223010.1	MBL fold metallo-hydrolase	-
AB3450_RS08745 (AB3450_08745)	comGA	1746429..1747403 (+)	975	WP_000697220.1	competence type IV pilus ATPase ComGA	Machinery gene
AB3450_RS08750 (AB3450_08750)	comGB	1747375..1748445 (+)	1071	WP_000776422.1	competence type IV pilus assembly protein ComGB	Machinery gene
AB3450_RS08755 (AB3450_08755)	comGC	1748459..1748770 (+)	312	WP_000472256.1	competence type IV pilus major pilin ComGC	Machinery gene
AB3450_RS08760 (AB3450_08760)	comGD	1748748..1749194 (+)	447	WP_001788899.1	competence type IV pilus minor pilin ComGD	Machinery gene
AB3450_RS08765 (AB3450_08765)	comGE	1749181..1749480 (+)	300	WP_000844413.1	hypothetical protein	Machinery gene
AB3450_RS08770 (AB3450_08770)	comGF	1749398..1749895 (+)	498	WP_001789864.1	competence type IV pilus minor pilin ComGF	Machinery gene
AB3450_RS08775 (AB3450_08775)	-	1749992..1750138 (+)	147	WP_001789879.1	hypothetical protein	-
AB3450_RS08780 (AB3450_08780)	-	1750128..1750652 (+)	525	WP_001015121.1	shikimate kinase	-
AB3450_RS08785 (AB3450_08785)	gcvT	1750811..1751902 (+)	1092	WP_000093349.1	glycine cleavage system aminomethyltransferase GcvT	-
AB3450_RS08790 (AB3450_08790)	gcvPA	1751922..1753268 (+)	1347	WP_368410236.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	-
AB3450_RS08795 (AB3450_08795)	gcvPB	1753261..1754733 (+)	1473	WP_000202189.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPB	-

Sequence

Protein

• Length: 165 a.a.
• Molecular weight: 19164.88 Da
• Isoelectric Point: 10.2192

>NTDB_id=1025825 AB3450_RS08770 WP_001789864.1 1749398..1749895(+) (comGF) [Staphylococcus aureus strain TUM20967]
MILSKVTNKFVLFQKIPLLIKRHVYSINVKAFSLIEMLVAMMVISITLLIVPDLIRLSKTFLIESRDLTTVDFEFFSRDI
LDDFKGVDRNDIEIRQHRIILHKGEEMIEYKLINNKIIKVVNDRGNITMINNVTAFTANIYYKSIIKITITVKVGTNVQT
KTIYV

Nucleotide

• Length: 498 bp

>NTDB_id=1025825 AB3450_RS08770 WP_001789864.1 1749398..1749895(+) (comGF) [Staphylococcus aureus strain TUM20967]
ATGATATTAAGCAAAGTGACCAACAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTAT
TAATGTCAAAGCTTTTTCGCTCATTGAAATGTTAGTAGCGATGATGGTTATAAGTATAACTTTACTAATTGTTCCAGACT
TAATTAGACTTAGTAAAACTTTTCTAATTGAAAGTAGGGATTTAACAACTGTAGATTTCGAATTTTTCTCAAGAGATATT
CTAGATGATTTTAAAGGAGTAGATAGAAACGATATTGAAATTAGGCAACACCGTATCATTTTACATAAAGGTGAAGAAAT
GATCGAATACAAATTAATTAATAATAAAATTATTAAAGTTGTAAATGACAGAGGAAATATAACAATGATTAATAATGTTA
CAGCATTTACTGCAAATATCTACTATAAATCCATTATTAAAATAACGATAACAGTTAAAGTCGGTACAAATGTGCAGACT
AAAACTATTTATGTATAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (67-155)

• Prokaryotic N-terminal methylation motif (N_methyl) (28-51)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF	Staphylococcus aureus MW2	100	100	1
comGF	Staphylococcus aureus N315	96.364	100	0.964