Detailed information NTG1024842

Bioinformatically predicted

Overview

• Name: comGC/cglC
• Type: Machinery gene
• Locus tag: ABW635_RS00915
• Genome accession: NZ_CP162310
• Coordinates: 146843..147169 (+)
• Length: 108 a.a.
• NCBI ID: WP_003098806.1
• Uniprot ID: -
• Organism: Streptococcus iniae strain ZQ2205
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 141843..152169

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABW635_RS00900 (ABW635_00900)	-	144508..144873 (+)	366	WP_003098799.1	DUF1033 family protein	-
ABW635_RS00905 (ABW635_00905)	comYA	144934..145875 (+)	942	WP_003098801.1	competence type IV pilus ATPase ComGA	Machinery gene
ABW635_RS00910 (ABW635_00910)	comYB	145826..146842 (+)	1017	WP_003098804.1	competence type IV pilus assembly protein ComGB	Machinery gene
ABW635_RS00915 (ABW635_00915)	comGC/cglC	146843..147169 (+)	327	WP_003098806.1	competence type IV pilus major pilin ComGC	Machinery gene
ABW635_RS00920 (ABW635_00920)	comGD	147129..147557 (+)	429	WP_003098807.1	competence type IV pilus minor pilin ComGD	-
ABW635_RS00925 (ABW635_00925)	comGE	147529..147822 (+)	294	WP_031239176.1	competence type IV pilus minor pilin ComGE	-
ABW635_RS00930 (ABW635_00930)	comYF	147782..148231 (+)	450	WP_119773875.1	competence type IV pilus minor pilin ComGF	Machinery gene
ABW635_RS00935 (ABW635_00935)	comGG	148221..148574 (+)	354	WP_003098812.1	competence type IV pilus minor pilin ComGG	-
ABW635_RS00940 (ABW635_00940)	comYH	148636..149592 (+)	957	WP_003098815.1	class I SAM-dependent methyltransferase	Machinery gene
ABW635_RS00945 (ABW635_00945)	-	149649..150845 (+)	1197	WP_003098816.1	acetate kinase	-
ABW635_RS00950 (ABW635_00950)	-	150968..151171 (+)	204	WP_003098819.1	helix-turn-helix transcriptional regulator	-
ABW635_RS00955 (ABW635_00955)	-	151184..151636 (+)	453	WP_003098820.1	hypothetical protein	-

Sequence

Protein

• Length: 108 a.a.
• Molecular weight: 12153.19 Da
• Isoelectric Point: 10.0312

>NTDB_id=1024842 ABW635_RS00915 WP_003098806.1 146843..147169(+) (comGC/cglC) [Streptococcus iniae strain ZQ2205]
MKTKCKQLKESRTKAFTLLEMLIVLLIISVLMLLFIPNLSKQKDKVTDAGNAAVVKIVENQAELYELTEGGKASLAQLQS
KGHITDKQAKAYQDYYAKNSDKHRQVNN

Nucleotide

• Length: 327 bp

>NTDB_id=1024842 ABW635_RS00915 WP_003098806.1 146843..147169(+) (comGC/cglC) [Streptococcus iniae strain ZQ2205]
ATGAAAACAAAATGTAAACAACTAAAAGAAAGCCGTACTAAAGCTTTCACACTTCTAGAAATGTTGATTGTTTTGCTAAT
TATTAGTGTTCTTATGCTACTGTTTATTCCGAATTTAAGTAAGCAAAAAGATAAGGTTACAGATGCTGGTAATGCTGCAG
TGGTTAAAATTGTTGAAAATCAGGCGGAACTATATGAATTAACGGAAGGTGGGAAAGCAAGCCTCGCTCAACTCCAATCA
AAAGGTCATATTACAGACAAACAAGCGAAGGCTTATCAGGATTATTATGCCAAAAACAGTGACAAGCATAGACAAGTTAA
CAACTAG

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (12-34)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC/cglC	Streptococcus pneumoniae TIGR4	59.259	100	0.593
comGC/cglC	Streptococcus pneumoniae D39	59.259	100	0.593
comGC/cglC	Streptococcus pneumoniae R6	59.259	100	0.593
comGC/cglC	Streptococcus pneumoniae Rx1	59.259	100	0.593
comGC/cglC	Streptococcus mitis SK321	63.366	93.519	0.593
comYC	Streptococcus gordonii str. Challis substr. CH1	61.165	95.37	0.583
comYC	Streptococcus mutans UA140	59.223	95.37	0.565
comYC	Streptococcus mutans UA159	59.223	95.37	0.565
comGC/cglC	Streptococcus mitis NCTC 12261	64.835	84.259	0.546
comGC	Lactococcus lactis subsp. cremoris KW2	51.376	100	0.519
comYC	Streptococcus suis isolate S10	60.92	80.556	0.491