Detailed information NTG1022573

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: AB1395_RS00840
• Genome accession: NZ_CP161815
• Coordinates: 146847..147242 (+)
• Length: 131 a.a.
• NCBI ID: WP_218653905.1
• Uniprot ID: -
• Organism: Streptococcus pluranimalium strain SS-15
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 141847..152242

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB1395_RS00800 (AB1395_00800)	-	142177..142848 (+)	672	WP_218653900.1	CPBP family intramembrane glutamic endopeptidase	-
AB1395_RS00805 (AB1395_00805)	proC	142893..143663 (-)	771	WP_367783533.1	pyrroline-5-carboxylate reductase	-
AB1395_RS00810 (AB1395_00810)	pepA	143703..144767 (-)	1065	WP_367783535.1	glutamyl aminopeptidase	-
AB1395_RS00815 (AB1395_00815)	-	144912..145112 (-)	201	WP_104967117.1	cold-shock protein	-
AB1395_RS00820 (AB1395_00820)	-	145304..145585 (+)	282	WP_218654381.1	DUF4651 domain-containing protein	-
AB1395_RS00825 (AB1395_00825)	-	145582..145896 (+)	315	WP_367783537.1	thioredoxin family protein	-
AB1395_RS00830 (AB1395_00830)	ytpR	145903..146529 (+)	627	WP_367783539.1	YtpR family tRNA-binding protein	-
AB1395_RS00835 (AB1395_00835)	-	146661..146783 (-)	123	Protein_124	class I SAM-dependent methyltransferase	-
AB1395_RS00840 (AB1395_00840)	ssbA	146847..147242 (+)	396	WP_218653905.1	single-stranded DNA-binding protein	Machinery gene
AB1395_RS00845 (AB1395_00845)	-	147509..148306 (+)	798	Protein_126	Cof-type HAD-IIB family hydrolase	-
AB1395_RS00850 (AB1395_00850)	-	148387..149352 (+)	966	WP_218653906.1	substrate-binding domain-containing protein	-
AB1395_RS00855 (AB1395_00855)	-	149352..150656 (+)	1305	WP_218653907.1	sensor histidine kinase	-
AB1395_RS00860 (AB1395_00860)	-	150666..151346 (+)	681	WP_218653908.1	response regulator transcription factor	-

Sequence

Protein

• Length: 131 a.a.
• Molecular weight: 14809.82 Da
• Isoelectric Point: 5.9496

>NTDB_id=1022573 AB1395_RS00840 WP_218653905.1 146847..147242(+) (ssbA) [Streptococcus pluranimalium strain SS-15]
MYNKTILIGRLVATPEIVKTPNDKSVARVTVAVNRRFKSKDGEREADFVNVVFWGRLAETLASYGTKGSLISLDGELRTR
SYEKDGQKHYMTEVLGQSFQLLESRAQRAMRENNVAADLADLVLEEEELPF

Nucleotide

• Length: 396 bp

>NTDB_id=1022573 AB1395_RS00840 WP_218653905.1 146847..147242(+) (ssbA) [Streptococcus pluranimalium strain SS-15]
ATGTATAATAAAACGATTTTAATTGGCCGCTTGGTAGCTACGCCTGAGATAGTGAAGACGCCTAATGATAAGTCTGTGGC
ACGTGTGACGGTTGCTGTCAATCGCCGCTTTAAGTCTAAGGATGGCGAGCGTGAAGCAGATTTTGTCAATGTAGTCTTTT
GGGGACGTTTGGCAGAAACACTGGCTTCTTACGGGACCAAGGGTAGTTTGATTTCATTGGATGGAGAGTTGCGAACGCGC
TCATATGAAAAAGACGGGCAAAAACACTATATGACAGAAGTCTTAGGACAATCCTTCCAATTGCTAGAAAGTCGTGCCCA
ACGTGCCATGCGTGAGAATAACGTAGCAGCAGACTTAGCGGATCTAGTGCTGGAAGAAGAGGAGCTACCCTTCTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (3-102)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Streptococcus mutans UA159	84.733	100	0.847
ssbB/cilA	Streptococcus pneumoniae TIGR4	78.626	100	0.786
ssbB/cilA	Streptococcus pneumoniae Rx1	77.863	100	0.779
ssbB/cilA	Streptococcus pneumoniae D39	77.863	100	0.779
ssbB/cilA	Streptococcus mitis SK321	77.863	100	0.779
ssbB/cilA	Streptococcus pneumoniae R6	77.863	100	0.779
ssbB	Streptococcus sobrinus strain NIDR 6715-7	77.863	100	0.779
ssbB/cilA	Streptococcus mitis NCTC 12261	76.336	100	0.763
ssbB	Lactococcus lactis subsp. cremoris KW2	64.035	87.023	0.557
ssbA	Bacillus subtilis subsp. subtilis str. 168	50	80.916	0.405
ssb	Latilactobacillus sakei subsp. sakei 23K	42.373	90.076	0.382