Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   ABNP43_RS04215 Genome accession   NZ_CP157878
Coordinates   850022..850813 (+) Length   263 a.a.
NCBI ID   WP_349925509.1    Uniprot ID   -
Organism   Bacillus altitudinis strain SCu11     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 845022..855813
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABNP43_RS04180 (ABNP43_04175) - 845110..845658 (+) 549 WP_008341670.1 thioredoxin family protein -
  ABNP43_RS04185 (ABNP43_04180) - 845997..846464 (+) 468 WP_007496690.1 DUF393 domain-containing protein -
  ABNP43_RS04190 (ABNP43_04185) - 846500..847756 (-) 1257 WP_008341668.1 transcriptional regulator -
  ABNP43_RS04195 (ABNP43_04190) - 848027..848614 (+) 588 WP_024720283.1 nitroreductase -
  ABNP43_RS04200 (ABNP43_04195) - 848650..848805 (-) 156 WP_008341997.1 YfhD family protein -
  ABNP43_RS04205 (ABNP43_04200) - 848867..848977 (-) 111 WP_017358836.1 YfhE family protein -
  ABNP43_RS04210 (ABNP43_04205) - 849030..849926 (-) 897 WP_349925507.1 TIGR01777 family oxidoreductase -
  ABNP43_RS04215 (ABNP43_04210) recX 850022..850813 (+) 792 WP_349925509.1 recombination regulator RecX Regulator
  ABNP43_RS04220 (ABNP43_04215) - 850817..851131 (+) 315 WP_212047356.1 YfhH family protein -
  ABNP43_RS04225 (ABNP43_04220) - 851155..851328 (-) 174 WP_003217811.1 YpzG family protein -
  ABNP43_RS04230 (ABNP43_04225) - 851354..851503 (-) 150 WP_003217849.1 small, acid-soluble spore protein K -
  ABNP43_RS04235 (ABNP43_04230) - 851620..851892 (+) 273 WP_017366871.1 YfhJ family protein -
  ABNP43_RS04240 (ABNP43_04235) - 852194..853177 (+) 984 WP_212047358.1 glycosyltransferase family 2 protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30660.12 Da        Isoelectric Point: 7.0789

>NTDB_id=1008796 ABNP43_RS04215 WP_349925509.1 850022..850813(+) (recX) [Bacillus altitudinis strain SCu11]
MPYITKISAQKNNTERVNIFLDEKYAFSVDLDVLVQHDLKKGKELDEADIIEIQFGDAVKKGFQQAVDYLSYRMRSVKEV
TDYLMKKDIPAPAISEIIHKLKHYKYVNDLEFAEAYVSTHRKTNSKGPSVLKKELKLKGIDDDTIEQALSQYPNDLQLEE
AVKQVLKLVKKEKNRSAKEIEQRIKLQLQRKGFSFDIIDKALQEAYDGQEEEKEEEALHYMLEKAKRKVGYDGSFEKKMK
VKQFLYRKGFDLDTIDHVLDKGE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=1008796 ABNP43_RS04215 WP_349925509.1 850022..850813(+) (recX) [Bacillus altitudinis strain SCu11]
ATGCCCTATATTACGAAAATCTCTGCTCAGAAAAACAATACAGAACGCGTGAACATCTTTCTTGATGAAAAGTACGCTTT
TAGCGTTGATCTAGATGTGCTCGTCCAGCATGATTTGAAAAAGGGAAAAGAGCTGGACGAAGCCGATATCATAGAGATTC
AATTCGGTGATGCAGTAAAAAAAGGATTTCAGCAGGCCGTCGATTATTTATCGTATCGGATGAGATCAGTGAAAGAAGTC
ACCGATTATTTGATGAAAAAAGACATACCAGCACCTGCTATTAGTGAAATTATACACAAATTAAAACATTATAAGTATGT
AAATGATCTTGAATTTGCAGAAGCATATGTAAGCACCCACCGAAAAACGAATAGCAAAGGCCCGTCAGTGCTAAAAAAAG
AATTAAAGCTGAAAGGCATAGACGATGATACCATCGAACAAGCACTATCGCAATATCCAAATGATTTGCAGCTAGAGGAA
GCAGTGAAACAAGTGCTGAAGCTGGTTAAGAAAGAGAAAAACCGGTCCGCAAAAGAAATTGAACAGCGTATCAAATTGCA
GCTTCAGCGAAAAGGATTTTCATTTGATATCATTGATAAAGCCCTTCAAGAAGCCTATGATGGACAAGAAGAGGAAAAGG
AAGAAGAAGCCCTTCACTATATGCTTGAGAAGGCAAAACGCAAGGTAGGATATGACGGATCATTTGAGAAAAAAATGAAA
GTGAAGCAATTCCTTTACCGAAAAGGATTTGATCTTGATACAATTGATCACGTTTTAGACAAAGGGGAATGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

63.498

100

0.635

Multiple sequence alignment