Detailed information NTG0100782

Bioinformatically predicted

Overview

• Name: ssb
• Type: Machinery gene
• Locus tag: QUD80_RS14060
• Genome accession: NZ_AP027302
• Coordinates: 2942914..2943366 (-)
• Length: 150 a.a.
• NCBI ID: WP_078127112.1
• Uniprot ID: -
• Organism: Enterococcus faecalis strain N4E
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 2937914..2948366

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QUD80_RS14025 (N4E_27590)	-	2939123..2939764 (-)	642	WP_010712139.1	hypothetical protein	-
QUD80_RS14630	-	2940075..2941520 (-)	1446	Protein_2731	glucosyltransferase domain-containing protein	-
QUD80_RS14045 (N4E_27640)	-	2941746..2942066 (-)	321	WP_010712137.1	hypothetical protein	-
QUD80_RS14050 (N4E_27650)	-	2942158..2942736 (-)	579	WP_010712136.1	thermonuclease family protein	-
QUD80_RS14055 (N4E_27660)	-	2942775..2942900 (-)	126	WP_010712135.1	hypothetical protein	-
QUD80_RS14060 (N4E_27670)	ssb	2942914..2943366 (-)	453	WP_078127112.1	single-stranded DNA-binding protein	Machinery gene
QUD80_RS14065 (N4E_27680)	-	2943433..2943927 (-)	495	WP_025189329.1	hypothetical protein	-
QUD80_RS14070 (N4E_27690)	-	2943982..2944212 (+)	231	WP_002360849.1	hypothetical protein	-
QUD80_RS14075 (N4E_27710)	-	2944800..2944931 (+)	132	WP_285603670.1	hypothetical protein	-
QUD80_RS14080 (N4E_27720)	-	2944924..2945250 (+)	327	WP_285603669.1	PcfO	-
QUD80_RS14085 (N4E_27730)	-	2945256..2945441 (+)	186	WP_010712133.1	hypothetical protein	-
QUD80_RS14090 (N4E_27740)	-	2945426..2945617 (+)	192	WP_002393732.1	DpnD/PcfM family protein	-
QUD80_RS14095 (N4E_27750)	-	2945641..2946231 (+)	591	WP_010712132.1	hypothetical protein	-
QUD80_RS14100 (N4E_27760)	-	2946336..2947109 (+)	774	WP_078127113.1	Cas9 inhibitor AcrIIA9 family protein	-

Sequence

Protein

• Length: 150 a.a.
• Molecular weight: 16854.80 Da
• Isoelectric Point: 4.9166

>NTDB_id=100782 QUD80_RS14060 WP_078127112.1 2942914..2943366(-) (ssb) [Enterococcus faecalis strain N4E]
MINNVTLVGRLTKDCDLRYTSSGVAVAAFTLAVNRNFTNQNGEREADYIQCVIWRKPAETLANYTRKGTLIGLVGRLQTR
NYENQQGQRIYVTEVVVESFQLLESKEVSQQRGVNASNPTPVGQQESNTQQPFPDLEGSFIEISDHDLPF

Nucleotide

• Length: 453 bp

>NTDB_id=100782 QUD80_RS14060 WP_078127112.1 2942914..2943366(-) (ssb) [Enterococcus faecalis strain N4E]
ATGATTAATAATGTGACTTTAGTAGGAAGACTTACAAAAGACTGTGATTTGCGTTATACGTCAAGTGGTGTAGCTGTTGC
GGCTTTTACACTAGCAGTTAACCGGAATTTTACAAATCAAAATGGTGAACGTGAAGCAGACTATATTCAGTGTGTGATTT
GGCGTAAACCTGCAGAAACTTTAGCAAACTATACACGAAAAGGAACATTGATTGGTCTTGTGGGTAGACTTCAAACACGT
AACTATGAGAATCAACAAGGACAACGTATTTATGTGACAGAAGTGGTTGTAGAAAGCTTCCAATTGTTAGAGTCAAAAGA
AGTTAGTCAACAACGTGGTGTTAACGCTTCTAATCCTACACCAGTTGGACAGCAGGAAAGCAATACGCAACAACCCTTTC
CAGATTTAGAAGGTAGTTTTATTGAGATTTCAGATCATGACTTACCGTTTTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (2-103)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssb	Latilactobacillus sakei subsp. sakei 23K	54.971	100	0.627
ssbA	Bacillus subtilis subsp. subtilis str. 168	52.023	100	0.6
ssbB/cilA	Streptococcus pneumoniae TIGR4	44	100	0.44
ssbB/cilA	Streptococcus pneumoniae D39	43.333	100	0.433
ssbB/cilA	Streptococcus pneumoniae Rx1	43.333	100	0.433
ssbB/cilA	Streptococcus pneumoniae R6	43.333	100	0.433
ssbB/cilA	Streptococcus mitis NCTC 12261	43.333	100	0.433
ssbB/cilA	Streptococcus mitis SK321	43.333	100	0.433
ssbB	Bacillus subtilis subsp. subtilis str. 168	58.491	70.667	0.413
ssbA	Streptococcus mutans UA159	40	100	0.4
ssbB	Streptococcus sobrinus strain NIDR 6715-7	47.458	78.667	0.373