Detailed information NTG1007491

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: ABKJ27_RS08455
• Genome accession: NZ_CP157578
• Coordinates: 1740108..1740542 (-)
• Length: 144 a.a.
• NCBI ID: WP_410011680.1
• Uniprot ID: -
• Organism: Streptococcus sp. KHUD_011
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1735108..1745542

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABKJ27_RS08420 (ABKJ27_08430)	rnpA	1735633..1736004 (-)	372	WP_000739245.1	ribonuclease P protein component	-
ABKJ27_RS08425 (ABKJ27_08435)	-	1736154..1737344 (-)	1191	WP_000167763.1	acetate kinase	-
ABKJ27_RS08430 (ABKJ27_08440)	comYH	1737394..1738347 (-)	954	WP_410011679.1	class I SAM-dependent methyltransferase	Machinery gene
ABKJ27_RS08435 (ABKJ27_08445)	-	1738408..1738995 (-)	588	WP_261052044.1	class I SAM-dependent methyltransferase	-
ABKJ27_RS08440 (ABKJ27_08450)	comGG/cglG	1739028..1739441 (-)	414	WP_223340416.1	competence type IV pilus minor pilin ComGG	Machinery gene
ABKJ27_RS08445 (ABKJ27_08455)	comGF/cglF	1739419..1739880 (-)	462	WP_020903618.1	competence type IV pilus minor pilin ComGF	Machinery gene
ABKJ27_RS08450 (ABKJ27_08460)	comGE/cglE	1739843..1740145 (-)	303	WP_153197443.1	competence type IV pilus minor pilin ComGE	Machinery gene
ABKJ27_RS08455 (ABKJ27_08465)	comGD/cglD	1740108..1740542 (-)	435	WP_410011680.1	competence type IV pilus minor pilin ComGD	Machinery gene
ABKJ27_RS08460 (ABKJ27_08470)	comGC/cglC	1740505..1740828 (-)	324	WP_020903620.1	competence type IV pilus major pilin ComGC	Machinery gene
ABKJ27_RS08465 (ABKJ27_08475)	comGB/cglB	1740830..1741846 (-)	1017	WP_410012147.1	competence type IV pilus assembly protein ComGB	Machinery gene
ABKJ27_RS08470 (ABKJ27_08480)	comGA/cglA/cilD	1741794..1742735 (-)	942	WP_410011681.1	competence type IV pilus ATPase ComGA	Machinery gene
ABKJ27_RS08475 (ABKJ27_08485)	-	1742812..1743177 (-)	366	WP_000286405.1	DUF1033 family protein	-
ABKJ27_RS08480 (ABKJ27_08490)	-	1743422..1744480 (-)	1059	WP_004257473.1	zinc-dependent alcohol dehydrogenase family protein	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 15684.16 Da
• Isoelectric Point: 10.5562

>NTDB_id=1007491 ABKJ27_RS08455 WP_410011680.1 1740108..1740542(-) (comGD/cglD) [Streptococcus sp. KHUD_011]
MLNKIPAKPLQIKAFTMLESLLILGLVSILALGLSGSVQSTFAAVGEQIFFMEFEELYRETQKRSVASQQKTSLNLDGQT
ISNGSQKLTVPKGIQAPSGQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 435 bp

>NTDB_id=1007491 ABKJ27_RS08455 WP_410011680.1 1740108..1740542(-) (comGD/cglD) [Streptococcus sp. KHUD_011]
ATGCTAAACAAAATACCAGCCAAACCGTTGCAGATTAAGGCTTTTACCATGCTTGAAAGTCTCTTGATTTTGGGACTTGT
GAGTATCCTTGCCTTGGGCTTGTCCGGCTCTGTTCAGTCCACTTTTGCGGCGGTAGGGGAGCAGATTTTCTTTATGGAGT
TTGAAGAACTTTATCGGGAAACACAAAAACGCAGTGTAGCTAGTCAGCAAAAGACTAGTCTAAATTTAGATGGGCAGACG
ATCAGTAATGGCAGCCAAAAGTTGACCGTTCCTAAAGGAATTCAGGCACCATCAGGACAAAGTATCACATTTGACCGAGC
TGGGGGAAATTCATCCCTGGCTAAGGTTGAATTTCAGACCAGCAAAGGAGCGATTCGTTATCAATTATATCTAGGAAATG
GAAAAATTAAACGCATTAAGGAAACAAAAAATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus mitis NCTC 12261	96.528	100	0.965
comGD/cglD	Streptococcus pneumoniae Rx1	96.992	92.361	0.896
comGD/cglD	Streptococcus pneumoniae D39	96.992	92.361	0.896
comGD/cglD	Streptococcus pneumoniae R6	96.992	92.361	0.896
comGD/cglD	Streptococcus mitis SK321	96.241	92.361	0.889
comGD/cglD	Streptococcus pneumoniae TIGR4	96.241	92.361	0.889
comYD	Streptococcus gordonii str. Challis substr. CH1	57.252	90.972	0.521
comYD	Streptococcus mutans UA140	48.837	89.583	0.437
comYD	Streptococcus mutans UA159	48.837	89.583	0.437