Detailed information NTG1007489

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: ABKJ27_RS08445
• Genome accession: NZ_CP157578
• Coordinates: 1739419..1739880 (-)
• Length: 153 a.a.
• NCBI ID: WP_020903618.1
• Uniprot ID: -
• Organism: Streptococcus sp. KHUD_011
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1734419..1744880

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABKJ27_RS08415 (ABKJ27_08425)	-	1734834..1735658 (-)	825	WP_205008446.1	membrane protein insertase YidC	-
ABKJ27_RS08420 (ABKJ27_08430)	rnpA	1735633..1736004 (-)	372	WP_000739245.1	ribonuclease P protein component	-
ABKJ27_RS08425 (ABKJ27_08435)	-	1736154..1737344 (-)	1191	WP_000167763.1	acetate kinase	-
ABKJ27_RS08430 (ABKJ27_08440)	comYH	1737394..1738347 (-)	954	WP_410011679.1	class I SAM-dependent methyltransferase	Machinery gene
ABKJ27_RS08435 (ABKJ27_08445)	-	1738408..1738995 (-)	588	WP_261052044.1	class I SAM-dependent methyltransferase	-
ABKJ27_RS08440 (ABKJ27_08450)	comGG/cglG	1739028..1739441 (-)	414	WP_223340416.1	competence type IV pilus minor pilin ComGG	Machinery gene
ABKJ27_RS08445 (ABKJ27_08455)	comGF/cglF	1739419..1739880 (-)	462	WP_020903618.1	competence type IV pilus minor pilin ComGF	Machinery gene
ABKJ27_RS08450 (ABKJ27_08460)	comGE/cglE	1739843..1740145 (-)	303	WP_153197443.1	competence type IV pilus minor pilin ComGE	Machinery gene
ABKJ27_RS08455 (ABKJ27_08465)	comGD/cglD	1740108..1740542 (-)	435	WP_410011680.1	competence type IV pilus minor pilin ComGD	Machinery gene
ABKJ27_RS08460 (ABKJ27_08470)	comGC/cglC	1740505..1740828 (-)	324	WP_020903620.1	competence type IV pilus major pilin ComGC	Machinery gene
ABKJ27_RS08465 (ABKJ27_08475)	comGB/cglB	1740830..1741846 (-)	1017	WP_410012147.1	competence type IV pilus assembly protein ComGB	Machinery gene
ABKJ27_RS08470 (ABKJ27_08480)	comGA/cglA/cilD	1741794..1742735 (-)	942	WP_410011681.1	competence type IV pilus ATPase ComGA	Machinery gene
ABKJ27_RS08475 (ABKJ27_08485)	-	1742812..1743177 (-)	366	WP_000286405.1	DUF1033 family protein	-
ABKJ27_RS08480 (ABKJ27_08490)	-	1743422..1744480 (-)	1059	WP_004257473.1	zinc-dependent alcohol dehydrogenase family protein	-

Sequence

Protein

• Length: 153 a.a.
• Molecular weight: 17849.42 Da
• Isoelectric Point: 7.1668

>NTDB_id=1007489 ABKJ27_RS08445 WP_020903618.1 1739419..1739880(-) (comGF/cglF) [Streptococcus sp. KHUD_011]
MVQNSCWLSKSHKVNAFTLLESLIALIVISGSLLLFQAMSQLLISEVRYQQQSEQKEWLLFVDQLEAELDRSQFEKVEGN
RLYMKQDGKEIAIGKSKSDDFRKTDASGRGYQPMIYGLKSAQITEDNQLVRFHFQFQKGLEREFIYRVEKEKS

Nucleotide

• Length: 462 bp

>NTDB_id=1007489 ABKJ27_RS08445 WP_020903618.1 1739419..1739880(-) (comGF/cglF) [Streptococcus sp. KHUD_011]
ATGGTTCAGAACAGTTGTTGGCTATCAAAGAGCCATAAGGTCAATGCTTTCACCTTGTTGGAATCACTGATTGCTCTCAT
TGTCATCAGTGGAAGTTTACTCCTCTTTCAAGCCATGAGTCAGCTCCTCATTTCAGAAGTTCGCTACCAGCAACAAAGCG
AGCAAAAGGAGTGGCTCTTGTTTGTGGACCAGCTGGAGGCAGAATTAGACCGTTCGCAATTCGAAAAAGTGGAGGGCAAT
CGCCTCTATATGAAGCAGGATGGCAAGGAAATTGCGATAGGTAAGTCAAAATCGGATGATTTTCGAAAAACTGATGCCAG
TGGACGAGGATATCAGCCTATGATTTATGGACTCAAATCAGCTCAGATTACAGAGGACAACCAACTGGTGCGCTTTCATT
TCCAGTTCCAAAAAGGCTTAGAAAGGGAGTTCATCTATCGTGTGGAAAAAGAAAAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (45-141)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus mitis NCTC 12261	94.118	100	0.941
comGF/cglF	Streptococcus mitis SK321	94.118	100	0.941
comGF/cglF	Streptococcus pneumoniae Rx1	92.81	100	0.928
comGF/cglF	Streptococcus pneumoniae D39	92.81	100	0.928
comGF/cglF	Streptococcus pneumoniae R6	92.81	100	0.928
comGF/cglF	Streptococcus pneumoniae TIGR4	92.81	100	0.928
comGF	Lactococcus lactis subsp. cremoris KW2	40	91.503	0.366