Detailed information NTG1006466

Bioinformatically predicted

Overview

• Name: comEA
• Type: Machinery gene
• Locus tag: ABKP85_RS09840
• Genome accession: NZ_CP157379
• Coordinates: 1948127..1948783 (-)
• Length: 218 a.a.
• NCBI ID: WP_014735120.1
• Uniprot ID: -
• Organism: Lactococcus cremoris strain NZ3900
• Function: dsDNA binding to the cell surface (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1943127..1953783

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABKP85_RS09800 (ABKP85_09780)	atpF	1943199..1943705 (-)	507	WP_010906128.1	F0F1 ATP synthase subunit B	-
ABKP85_RS09805 (ABKP85_09785)	atpB	1943720..1944433 (-)	714	WP_004255255.1	F0F1 ATP synthase subunit A	-
ABKP85_RS09810 (ABKP85_09790)	-	1944480..1944695 (-)	216	WP_004255250.1	F0F1 ATP synthase subunit C	-
ABKP85_RS09815 (ABKP85_09795)	-	1944878..1945654 (-)	777	WP_011835694.1	alpha/beta hydrolase family protein	-
ABKP85_RS09820	comEC	1945938..1946231 (-)	294	WP_406846209.1	ComEC/Rec2 family competence protein	Machinery gene
ABKP85_RS09825	comEC	1946279..1946731 (-)	453	WP_406846214.1	ComEC/Rec2 family competence protein	Machinery gene
ABKP85_RS09830	-	1946873..1947121 (-)	249	Protein_1918	DNA internalization-related competence protein ComEC/Rec2	-
ABKP85_RS09835	comEC	1947115..1947999 (-)	885	WP_406846210.1	ComEC/Rec2 family competence protein	Machinery gene
ABKP85_RS09840 (ABKP85_09805)	comEA	1948127..1948783 (-)	657	WP_014735120.1	helix-hairpin-helix domain-containing protein	Machinery gene
ABKP85_RS09845 (ABKP85_09810)	-	1948841..1950202 (-)	1362	WP_011835696.1	ABC transporter permease	-
ABKP85_RS09850 (ABKP85_09815)	-	1950199..1951131 (-)	933	WP_011835697.1	ABC transporter ATP-binding protein	-
ABKP85_RS09855 (ABKP85_09820)	-	1951751..1952311 (-)	561	WP_011835699.1	GNAT family N-acetyltransferase	-
ABKP85_RS09860 (ABKP85_09825)	-	1952485..1953663 (-)	1179	WP_014735121.1	SLC13 family permease	-

Sequence

Protein

• Length: 218 a.a.
• Molecular weight: 23674.86 Da
• Isoelectric Point: 5.1730

>NTDB_id=1006466 ABKP85_RS09840 WP_014735120.1 1948127..1948783(-) (comEA) [Lactococcus cremoris strain NZ3900]
MEKILDKLKEYWKIMLLVVCALIAGGILYIFTNSPKPAETLSIENLSSSSTKSSVSKFNSSSSEKNKNEIMVDLKGAVAK
PNVYQISSDERLVDLIRQAGGFTDQADPKSINLSAKLKDEEVIYVPKVGESSSSESTDSPTGSSVSNQVSTTSGPKVNIN
KADLTELQKLTGIGQKKAQDIIDFRMKNGDFKSIEDLGKVSGFGDKTLEKLKDEISID

Nucleotide

• Length: 657 bp

>NTDB_id=1006466 ABKP85_RS09840 WP_014735120.1 1948127..1948783(-) (comEA) [Lactococcus cremoris strain NZ3900]
ATGGAAAAAATTTTAGATAAATTAAAAGAATACTGGAAAATAATGCTTTTAGTTGTTTGTGCACTTATTGCTGGTGGAAT
TCTTTATATTTTCACCAATTCACCAAAGCCAGCTGAAACTCTGTCAATAGAAAATTTGAGCTCTAGTTCTACCAAAAGCT
CTGTCAGTAAATTTAATAGTAGCAGTAGTGAAAAAAATAAAAATGAAATTATGGTTGATTTAAAAGGAGCGGTTGCAAAA
CCTAATGTATACCAAATTTCGTCAGATGAGCGCCTTGTTGATTTAATTAGGCAAGCGGGAGGATTTACTGACCAAGCAGA
CCCAAAATCAATCAATCTGTCAGCGAAACTTAAAGATGAAGAAGTGATTTATGTACCAAAAGTTGGGGAAAGTTCAAGTT
CAGAAAGTACTGACAGTCCTACTGGTAGCTCTGTCAGTAATCAAGTTTCAACGACAAGTGGTCCAAAAGTAAATATCAAT
AAAGCAGACCTGACAGAATTACAAAAACTGACTGGAATTGGTCAAAAAAAAGCGCAAGATATTATTGATTTTCGCATGAA
AAATGGTGACTTTAAATCAATAGAGGATTTGGGTAAAGTATCTGGCTTTGGGGATAAAACATTAGAAAAACTGAAAGATG
AGATTTCTATTGATTAA

Domains

Predicted by InterproScan.

• SLBB domain (SLBB) (71-126)

• Helix-hairpin-helix motif (HHH_3) (154-215)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEA	Lactococcus lactis subsp. cremoris KW2	98.165	100	0.982
comEA/celA/cilE	Streptococcus pneumoniae TIGR4	41.41	100	0.431
comEA/celA/cilE	Streptococcus mitis SK321	41.778	100	0.431
comEA/celA/cilE	Streptococcus mitis NCTC 12261	40.529	100	0.422
comEA/celA/cilE	Streptococcus pneumoniae R6	40.991	100	0.417
comEA/celA/cilE	Streptococcus pneumoniae Rx1	40.991	100	0.417
comEA/celA/cilE	Streptococcus pneumoniae D39	40.991	100	0.417
comEA	Latilactobacillus sakei subsp. sakei 23K	37.021	100	0.399
comEA	Staphylococcus aureus MW2	35.931	100	0.381
comEA	Staphylococcus aureus N315	36.866	99.541	0.367