Detailed information
Bioinformatically predicted
Overview
| Name | ssbB/cilA | Type | Machinery gene |
| Locus tag | ABC807_RS01855 | Genome accession | NZ_CP156625 |
| Coordinates | 346119..346514 (+) | Length | 131 a.a. |
| NCBI ID | WP_000282443.1 | Uniprot ID | A0A0E8PDH7 |
| Organism | Streptococcus pneumoniae strain TL7/1993 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 341119..351514
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABC807_RS01805 (ABC807_01805) | - | 341244..341606 (+) | 363 | WP_000078805.1 | DUF2200 domain-containing protein | - |
| ABC807_RS01810 (ABC807_01810) | - | 341603..342106 (+) | 504 | WP_000800942.1 | phosphatase PAP2 family protein | - |
| ABC807_RS01815 (ABC807_01815) | - | 342220..342666 (+) | 447 | WP_000776589.1 | LytTR family DNA-binding domain-containing protein | - |
| ABC807_RS01820 (ABC807_01820) | - | 342672..343346 (+) | 675 | WP_000725750.1 | membrane protein | - |
| ABC807_RS01825 (ABC807_01825) | - | 343507..343698 (+) | 192 | WP_000291826.1 | cell wall-binding protein | - |
| ABC807_RS01830 (ABC807_01830) | - | 343723..343785 (+) | 63 | WP_219335288.1 | hypothetical protein | - |
| ABC807_RS01835 (ABC807_01835) | - | 343983..344282 (+) | 300 | WP_001013974.1 | DUF4651 domain-containing protein | - |
| ABC807_RS01840 (ABC807_01840) | - | 344279..344596 (+) | 318 | WP_000615769.1 | thioredoxin family protein | - |
| ABC807_RS01845 (ABC807_01845) | ytpR | 344612..345238 (+) | 627 | WP_000578289.1 | YtpR family tRNA-binding protein | - |
| ABC807_RS01850 (ABC807_01850) | - | 345280..346041 (+) | 762 | WP_001107758.1 | SDR family NAD(P)-dependent oxidoreductase | - |
| ABC807_RS01855 (ABC807_01855) | ssbB/cilA | 346119..346514 (+) | 396 | WP_000282443.1 | single-stranded DNA-binding protein | Machinery gene |
| ABC807_RS01860 (ABC807_01860) | groES | 346670..346954 (+) | 285 | WP_000917299.1 | co-chaperone GroES | - |
| ABC807_RS01865 (ABC807_01865) | groL | 346970..348592 (+) | 1623 | WP_000031573.1 | chaperonin GroEL | - |
| ABC807_RS01870 (ABC807_01870) | - | 348691..349997 (-) | 1307 | Protein_339 | transposase | - |
| ABC807_RS01875 (ABC807_01875) | - | 350158..350364 (+) | 207 | WP_000775827.1 | transcriptional regulator | - |
| ABC807_RS01880 (ABC807_01880) | - | 350719..351252 (-) | 534 | WP_000775321.1 | DUF402 domain-containing protein | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 14935.91 Da Isoelectric Point: 5.9409
>NTDB_id=1001825 ABC807_RS01855 WP_000282443.1 346119..346514(+) (ssbB/cilA) [Streptococcus pneumoniae strain TL7/1993]
MYNKVILIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREVDFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF
MYNKVILIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREVDFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF
Nucleotide
Download Length: 396 bp
>NTDB_id=1001825 ABC807_RS01855 WP_000282443.1 346119..346514(+) (ssbB/cilA) [Streptococcus pneumoniae strain TL7/1993]
ATGTATAATAAAGTTATCTTGATTGGACGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCAGTAGC
GCGAGCAACTATCGCTGTCAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGTTGATTTTGTCAATATGGTCCTAT
GGGGCAGACTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGTCAGATGAATTATGTAACCGAAGTCCTTGTGACAGGATTCCAACTCTTGGAAAGTCGTGCCCA
ACGTGCTATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTGGTCTTGGAAGAGGAAGAATTGCCATTTTAA
ATGTATAATAAAGTTATCTTGATTGGACGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCAGTAGC
GCGAGCAACTATCGCTGTCAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGTTGATTTTGTCAATATGGTCCTAT
GGGGCAGACTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGTCAGATGAATTATGTAACCGAAGTCCTTGTGACAGGATTCCAACTCTTGGAAAGTCGTGCCCA
ACGTGCTATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTGGTCTTGGAAGAGGAAGAATTGCCATTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
99.237 |
100 |
0.992 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
98.473 |
100 |
0.985 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
98.473 |
100 |
0.985 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
98.473 |
100 |
0.985 |
| ssbB/cilA | Streptococcus mitis SK321 |
98.473 |
100 |
0.985 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
96.947 |
100 |
0.969 |
| ssbA | Streptococcus mutans UA159 |
74.809 |
100 |
0.748 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
70.229 |
100 |
0.702 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
59.821 |
85.496 |
0.511 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
50.943 |
80.916 |
0.412 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
46.903 |
86.26 |
0.405 |