NT genes of 'Mannheimia sp. ZY171111'
In this species, transformation by exogenous DNA is regulated by the presence of a specific Uptake Signal Sequence (USS) (PMID: 17038178).
| Gene name | Gene type | Function | Related MGE | Organism | Genome accession | Locus tag | Protein ID |
|---|---|---|---|---|---|---|---|
 ssb |
Machinery gene | DNA processing | Prophage | Mannheimia sp. ZY171111 | NZ_CP046532 | GM698_RS10250 | WP_209289403.1 |
| pilC |
Machinery gene | DNA binding and uptake | - | Mannheimia sp. ZY171111 | NZ_CP046532 | GM698_RS00790 | WP_176812460.1 |
| pilB |
Machinery gene | DNA binding and uptake | - | Mannheimia sp. ZY171111 | NZ_CP046532 | GM698_RS00795 | WP_209289485.1 |
| pilA |
Machinery gene | DNA binding and uptake | - | Mannheimia sp. ZY171111 | NZ_CP046532 | GM698_RS00800 | WP_209289486.1 |
| radA |
Machinery gene | Homologous recombination | - | Mannheimia sp. ZY171111 | NZ_CP046532 | GM698_RS00805 | WP_176808292.1 |
| comE |
Machinery gene | DNA binding and uptake | - | Mannheimia sp. ZY171111 | NZ_CP046532 | GM698_RS01965 | WP_176812332.1 |
| recA |
Machinery gene | Homologous recombination | - | Mannheimia sp. ZY171111 | NZ_CP046532 | GM698_RS02065 | WP_159629272.1 |
| pilF |
Machinery gene | DNA binding and uptake | - | Mannheimia sp. ZY171111 | NZ_CP046532 | GM698_RS02660 | WP_209289626.1 |
| comEA/comE1 |
Machinery gene | DNA binding and uptake | - | Mannheimia sp. ZY171111 | NZ_CP046532 | GM698_RS03725 | WP_159629038.1 |
| dprA |
Machinery gene | DNA processing | - | Mannheimia sp. ZY171111 | NZ_CP046532 | GM698_RS04310 | WP_209289706.1 |
| ssb |
Machinery gene | DNA processing | - | Mannheimia sp. ZY171111 | NZ_CP046532 | GM698_RS08115 | WP_176808828.1 |
Experimentally validated
Bioinformatically predicted