Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | HWQ57_RS29100 | Genome accession | NZ_CP058333 |
| Coordinates | 6236152..6236775 (+) | Length | 207 a.a. |
| NCBI ID | WP_023110484.1 | Uniprot ID | - |
| Organism | Pseudomonas aeruginosa strain ACR20 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 6231152..6241775
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HWQ57_RS29085 (HWQ57_28885) | - | 6231839..6234310 (-) | 2472 | WP_179118826.1 | penicillin-binding protein 1A | - |
| HWQ57_RS29090 (HWQ57_28890) | pilM | 6234495..6235559 (+) | 1065 | WP_003110888.1 | type IV pilus assembly protein PilM | Machinery gene |
| HWQ57_RS29095 (HWQ57_28895) | pilN | 6235559..6236155 (+) | 597 | WP_003141783.1 | type 4a pilus biogenesis protein PilN | - |
| HWQ57_RS29100 (HWQ57_28900) | pilO | 6236152..6236775 (+) | 624 | WP_023110484.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| HWQ57_RS29105 (HWQ57_28905) | comL/pilP | 6236772..6237296 (+) | 525 | WP_003116136.1 | type 4a pilus biogenesis lipoprotein PilP | Machinery gene |
| HWQ57_RS29110 (HWQ57_28910) | pilQ | 6237350..6239482 (+) | 2133 | WP_023110483.1 | type 4a pilus secretin PilQ | Machinery gene |
| HWQ57_RS29115 (HWQ57_28915) | aroK | 6239494..6240012 (+) | 519 | WP_003095833.1 | shikimate kinase AroK | - |
| HWQ57_RS29120 (HWQ57_28920) | aroB | 6240062..6241168 (+) | 1107 | WP_003116138.1 | 3-dehydroquinate synthase | - |
Sequence
Protein
Download Length: 207 a.a. Molecular weight: 23027.46 Da Isoelectric Point: 5.0913
>NTDB_id=405178 HWQ57_RS29100 WP_023110484.1 6236152..6236775(+) (pilO) [Pseudomonas aeruginosa strain ACR20]
MSLASSLESLRKIDVNDLDLNNIGSWPAAVKVIVCVLLTAAVLALGYNFHLRDLQTQLEQQAAQEESLKQQFATKAFQAA
NLEAYKAQMKEMEESFGALLRQLPSDTEVPGLLEDITRTGLGSGLEFEEIKLLPEVTQQFYIELPIQISVVGGYHDLATF
VSGVSSLPRIVTLHDFEIKPASPDNTSKLRMRILAKTYRYNDKGLKK
MSLASSLESLRKIDVNDLDLNNIGSWPAAVKVIVCVLLTAAVLALGYNFHLRDLQTQLEQQAAQEESLKQQFATKAFQAA
NLEAYKAQMKEMEESFGALLRQLPSDTEVPGLLEDITRTGLGSGLEFEEIKLLPEVTQQFYIELPIQISVVGGYHDLATF
VSGVSSLPRIVTLHDFEIKPASPDNTSKLRMRILAKTYRYNDKGLKK
Nucleotide
Download Length: 624 bp
>NTDB_id=405178 HWQ57_RS29100 WP_023110484.1 6236152..6236775(+) (pilO) [Pseudomonas aeruginosa strain ACR20]
ATGAGTCTGGCCAGTTCCCTGGAAAGTCTGCGCAAGATCGACGTAAACGACCTCGATCTGAACAACATCGGTTCCTGGCC
GGCGGCGGTCAAGGTCATCGTCTGCGTGCTGCTGACCGCGGCGGTCCTGGCGCTGGGCTACAACTTCCATCTCCGTGACT
TGCAAACACAGCTCGAACAGCAGGCTGCGCAAGAAGAATCGCTCAAGCAGCAATTTGCTACCAAAGCGTTCCAGGCCGCG
AACCTGGAAGCCTACAAGGCACAGATGAAAGAGATGGAGGAGTCCTTCGGCGCCTTGCTGCGGCAGTTGCCCAGCGACAC
CGAGGTACCCGGGCTGCTCGAGGACATCACTCGTACCGGTCTGGGCAGCGGCCTGGAGTTCGAGGAGATCAAGCTGCTCC
CTGAAGTCACTCAGCAGTTCTATATCGAGCTGCCGATCCAGATCAGCGTGGTCGGCGGCTACCACGACCTGGCGACCTTC
GTCAGCGGCGTGTCCAGCCTGCCGCGGATCGTTACCCTGCATGACTTCGAGATCAAGCCGGCTTCGCCCGATAACACCTC
GAAGCTGCGCATGAGGATCCTGGCCAAGACCTACCGCTACAACGACAAGGGGCTGAAGAAATGA
ATGAGTCTGGCCAGTTCCCTGGAAAGTCTGCGCAAGATCGACGTAAACGACCTCGATCTGAACAACATCGGTTCCTGGCC
GGCGGCGGTCAAGGTCATCGTCTGCGTGCTGCTGACCGCGGCGGTCCTGGCGCTGGGCTACAACTTCCATCTCCGTGACT
TGCAAACACAGCTCGAACAGCAGGCTGCGCAAGAAGAATCGCTCAAGCAGCAATTTGCTACCAAAGCGTTCCAGGCCGCG
AACCTGGAAGCCTACAAGGCACAGATGAAAGAGATGGAGGAGTCCTTCGGCGCCTTGCTGCGGCAGTTGCCCAGCGACAC
CGAGGTACCCGGGCTGCTCGAGGACATCACTCGTACCGGTCTGGGCAGCGGCCTGGAGTTCGAGGAGATCAAGCTGCTCC
CTGAAGTCACTCAGCAGTTCTATATCGAGCTGCCGATCCAGATCAGCGTGGTCGGCGGCTACCACGACCTGGCGACCTTC
GTCAGCGGCGTGTCCAGCCTGCCGCGGATCGTTACCCTGCATGACTTCGAGATCAAGCCGGCTTCGCCCGATAACACCTC
GAAGCTGCGCATGAGGATCCTGGCCAAGACCTACCGCTACAACGACAAGGGGCTGAAGAAATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Legionella pneumophila strain ERS1305867 |
45.596 |
93.237 |
0.425 |
| pilO | Acinetobacter baumannii D1279779 |
45.263 |
91.787 |
0.415 |
| comO/pilO | Acinetobacter baylyi ADP1 |
43.617 |
90.821 |
0.396 |