NT genes of 'Lonepinella sp. MS14436'
In this species, transformation by exogenous DNA is regulated by the presence of a specific Uptake Signal Sequence (USS) (PMID: 17038178).
| Gene name | Gene type | Function | Related MGE | Organism | Genome accession | Locus tag | Protein ID |
|---|---|---|---|---|---|---|---|
 ssb |
Machinery gene | DNA processing | - | Lonepinella sp. MS14436 | NZ_CP170385 | O1Q81_RS00190 | WP_386697654.1 |
| comM |
Machinery gene | Involve in natural transformation | - | Lonepinella sp. MS14436 | NZ_CP170385 | O1Q81_RS00470 | WP_386698589.1 |
| dprA |
Machinery gene | DNA processing | - | Lonepinella sp. MS14436 | NZ_CP170385 | O1Q81_RS01335 | WP_386697815.1 |
| recA |
Machinery gene | Homologous recombination | - | Lonepinella sp. MS14436 | NZ_CP170385 | O1Q81_RS01360 | WP_386691867.1 |
| comE1/comEA |
Machinery gene | DNA binding and uptake | - | Lonepinella sp. MS14436 | NZ_CP170385 | O1Q81_RS03590 | WP_386698259.1 |
| comN |
Machinery gene | DNA binding and uptake | - | Lonepinella sp. MS14436 | NZ_CP170385 | O1Q81_RS04310 | WP_386698405.1 |
| comQ |
Machinery gene | DNA binding and uptake | - | Lonepinella sp. MS14436 | NZ_CP170385 | O1Q81_RS04325 | WP_386695942.1 |
| ceuB |
Machinery gene | DNA binding and uptake | - | Lonepinella sp. MS14436 | NZ_CP170385 | O1Q81_RS05930 | WP_386696509.1 |
| ssb |
Machinery gene | DNA processing | Prophage | Lonepinella sp. MS14436 | NZ_CP170385 | O1Q81_RS07070 | WP_386696764.1 |
| rec2 |
Machinery gene | DNA binding and uptake | Prophage | Lonepinella sp. MS14436 | NZ_CP170385 | O1Q81_RS07480 | WP_386696862.1 |
| pilF/pilF2 |
Machinery gene | DNA binding and uptake | - | Lonepinella sp. MS14436 | NZ_CP170385 | O1Q81_RS08765 | WP_386697139.1 |
| pilC |
Machinery gene | DNA binding and uptake | - | Lonepinella sp. MS14436 | NZ_CP170385 | O1Q81_RS09340 | WP_386697286.1 |
| pilB |
Machinery gene | DNA binding and uptake | - | Lonepinella sp. MS14436 | NZ_CP170385 | O1Q81_RS09345 | WP_386697288.1 |
| pilA |
Machinery gene | DNA binding and uptake | - | Lonepinella sp. MS14436 | NZ_CP170385 | O1Q81_RS09350 | WP_386694674.1 |
| comE |
Machinery gene | DNA binding and uptake | - | Lonepinella sp. MS14436 | NZ_CP170385 | O1Q81_RS09665 | WP_386697371.1 |
Experimentally validated
Bioinformatically predicted