Detailed information NTG1056498

Bioinformatically predicted

Overview

• Name: rec2
• Type: Machinery gene
• Locus tag: O1Q81_RS07480
• Genome accession: NZ_CP170385
• Coordinates: 1534365..1536752 (-)
• Length: 795 a.a.
• NCBI ID: WP_386696862.1
• Uniprot ID: -
• Organism: Lonepinella sp. MS14436
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Prophage	1532556..1547007	1534365..1536752	within	0

Gene organization within MGE regions

Location: 1532556..1547007

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
O1Q81_RS07475 (O1Q81_01492)	msbA	1532556..1534304 (-)	1749	WP_386694088.1	lipid A ABC transporter ATP-binding protein/permease MsbA	-
O1Q81_RS07480 (O1Q81_01493)	rec2	1534365..1536752 (-)	2388	WP_386696862.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
O1Q81_RS07485 (O1Q81_01494)	dksA	1537041..1537487 (+)	447	WP_386686474.1	RNA polymerase-binding protein DksA	-
O1Q81_RS07490 (O1Q81_01495)	pcnB	1537764..1539020 (+)	1257	WP_386696864.1	polynucleotide adenylyltransferase PcnB	-
O1Q81_RS07495 (O1Q81_01496)	folK	1539024..1539512 (+)	489	WP_386696866.1	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	-
O1Q81_RS07500 (O1Q81_01497)	-	1539753..1541693 (+)	1941	WP_386696868.1	ABC transporter ATP-binding protein	-
O1Q81_RS07505 (O1Q81_01498)	-	1541982..1542356 (+)	375	WP_386696870.1	type II toxin-antitoxin system RelE/ParE family toxin	-
O1Q81_RS07510 (O1Q81_01499)	-	1542356..1542664 (+)	309	WP_386694103.1	helix-turn-helix domain-containing protein	-
O1Q81_RS07515 (O1Q81_01500)	parE	1542796..1544745 (+)	1950	WP_386694106.1	DNA topoisomerase IV subunit B	-
O1Q81_RS07520 (O1Q81_01501)	parC	1544758..1547007 (+)	2250	WP_386696872.1	DNA topoisomerase IV subunit A	-

Sequence

Protein

• Length: 795 a.a.
• Molecular weight: 91039.84 Da
• Isoelectric Point: 9.5755

>NTDB_id=1056498 O1Q81_RS07480 WP_386696862.1 1534365..1536752(-) (rec2) [Lonepinella sp. MS14436]
MQRILGLIRQLDIDEVAFCAILSVLSLYFLPERFLFCWQLCLLLFSLLLILRLVIKKTQFIIKWINSILILLVFIGYAHF
IALNSLQQAQIFPQKIQTTFRIVEIHHQGDYQSLVLQTEQPNRRIYATWKVAQSPKLGELWQGELQLRPISSRLNISGFD
RQIWYFAKDIQAWGTVKSAVKIAQDFSWREQCLADSLMQTQGLTQQGLLLALGFGERAWLNPDTWKIYQQTNTAHLIAIS
GLHIGLAMALGFCFGRVVQYMLPTPKITPIFPLCCGVVSALFYANLAGFAIPTLRASIALLILILLHFYRAYCTAWQLYF
RVVALLLLYDPLMILSTSFWLSIGAVGCLILWYQLFPLHLLRWRGLPLSPKVRWILALFHLQLGLFCLFTPIQLAFFNGF
SLQGFWANLLIVPLYSFLLVPVVLFAVFSNGSLYSWRLADFVADKITDLLSLFQQGWLSLSYLQSAYFNILLAFLIWGML
YKIYTSNRKNVSYHKKPRCFSLKSDRSLSPILYARVQKGILLFILANGLQPLWHYFYQSDWQIDTLDVGQGLATLIMKNQ
RGILYDTGASWQGGSMAELEIIPYLQRQGITLDYLIISHDDNDHAGGARAILQAFPQAMLVSPSQKNYSEKHRTFCQAEK
QWLWQGIQIKVLSPKQIVEKADNFHSCVLWLEKDKHSLLLTGDADIATERQILPLLNKVEVLQVGHHGSKTSTGQGLVNK
LQPDIALISSGRWNPWHFPNRSVMKRLQQAQSAVYNTAISGQISVRFYAEQTKVVTARNAFSPWYQQIIDVQYSD

Nucleotide

• Length: 2388 bp

>NTDB_id=1056498 O1Q81_RS07480 WP_386696862.1 1534365..1536752(-) (rec2) [Lonepinella sp. MS14436]
ATGCAGAGAATATTGGGATTAATCCGTCAATTAGATATAGATGAAGTTGCTTTTTGTGCGATTTTATCTGTGTTGTCTTT
GTATTTTCTACCTGAAAGATTTTTATTCTGTTGGCAACTTTGTTTACTTTTATTTTCCCTTTTGCTCATTTTGCGACTGG
TGATCAAAAAAACACAATTTATTATAAAATGGATTAACAGCATATTGATTCTATTAGTATTTATTGGTTATGCTCATTTC
ATTGCTCTGAATTCCTTACAACAAGCCCAAATTTTCCCACAAAAAATTCAAACCACTTTTCGTATTGTGGAAATTCATCA
TCAGGGAGATTATCAATCTTTGGTATTGCAAACTGAACAACCCAACAGACGAATTTATGCAACTTGGAAAGTGGCTCAAT
CTCCCAAATTAGGTGAATTGTGGCAAGGCGAATTACAACTTAGACCAATTTCATCTCGCCTAAATATCAGTGGCTTTGAT
CGACAAATATGGTATTTTGCCAAAGATATTCAAGCATGGGGAACGGTAAAAAGTGCGGTGAAAATTGCACAAGATTTTTC
TTGGCGAGAACAGTGTTTGGCGGACAGTTTGATGCAAACGCAAGGATTAACACAGCAAGGATTATTATTAGCCTTAGGGT
TTGGTGAACGGGCTTGGTTAAATCCCGATACGTGGAAAATTTATCAGCAAACTAATACTGCTCATCTCATTGCTATTTCG
GGGTTGCATATTGGTTTGGCGATGGCTCTTGGTTTTTGTTTCGGGCGAGTGGTGCAATATATGTTACCCACTCCAAAAAT
TACCCCGATTTTTCCTTTATGTTGTGGTGTTGTATCAGCCTTATTTTATGCTAACTTAGCGGGGTTCGCTATTCCTACAT
TGCGAGCTAGTATAGCATTATTGATTTTGATCTTATTGCATTTTTATCGAGCTTATTGTACCGCTTGGCAACTGTATTTT
CGTGTTGTTGCATTATTATTACTCTACGATCCATTGATGATTTTATCCACCAGTTTCTGGTTATCAATCGGTGCGGTGGG
TTGTTTAATTTTGTGGTATCAACTTTTTCCATTGCATTTACTTAGATGGCGAGGTTTACCGTTATCTCCCAAAGTGCGGT
GGATTTTGGCATTGTTTCATTTGCAACTGGGGTTATTTTGCTTATTTACCCCAATTCAATTAGCCTTTTTCAATGGTTTT
TCCTTGCAAGGTTTTTGGGCGAATTTATTGATCGTCCCCTTATACAGTTTTTTGCTTGTGCCAGTCGTTTTATTTGCAGT
GTTTAGCAATGGTAGTTTGTATAGTTGGCGACTGGCGGATTTCGTTGCCGATAAGATTACGGATTTATTATCTTTGTTTC
AACAGGGTTGGTTAAGTTTATCTTATTTGCAGAGTGCTTATTTTAATATCCTACTAGCTTTTTTAATATGGGGAATGTTG
TATAAAATCTATACTTCGAATAGGAAAAATGTAAGTTATCACAAAAAACCACGTTGTTTTTCCTTAAAATCCGATCGTAG
TTTATCACCAATACTTTATGCTCGAGTACAAAAAGGCATCTTATTGTTCATATTGGCAAATGGACTACAACCTTTATGGC
ATTATTTTTATCAATCTGACTGGCAAATAGATACCCTTGATGTCGGACAAGGATTAGCCACCTTAATCATGAAAAATCAA
CGGGGGATTTTGTACGATACTGGGGCAAGCTGGCAAGGGGGAAGTATGGCTGAACTGGAAATTATTCCGTATTTACAACG
ACAAGGCATTACTTTAGATTATCTGATTATTAGTCATGATGATAACGATCATGCGGGCGGTGCAAGAGCAATATTACAAG
CATTTCCACAAGCAATGTTGGTAAGCCCTTCACAAAAAAACTATAGCGAAAAACACCGCACTTTTTGCCAAGCAGAAAAA
CAATGGCTGTGGCAAGGCATACAAATTAAAGTGTTATCGCCAAAGCAAATTGTGGAAAAGGCGGACAATTTTCATTCTTG
TGTATTATGGTTGGAAAAAGATAAACATAGCTTGTTGTTAACAGGGGATGCGGATATTGCCACTGAACGACAAATTTTAC
CTTTACTAAATAAAGTAGAAGTGTTGCAAGTTGGGCATCATGGTAGTAAGACCTCTACAGGGCAGGGATTGGTTAATAAG
CTGCAACCTGATATTGCGTTAATTTCCAGTGGTCGTTGGAATCCGTGGCACTTTCCAAATAGATCTGTTATGAAACGTTT
ACAGCAGGCTCAAAGTGCGGTGTATAACACGGCAATTTCAGGGCAAATTTCGGTGCGATTTTATGCAGAACAAACAAAAG
TTGTAACCGCCAGAAATGCTTTTAGTCCTTGGTATCAACAGATTATTGATGTTCAATATAGTGATTAA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (547-729)

• Domain of unknown function (DUF4131) (DUF4131) (38-179)

• Competence protein (Competence) (212-480)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rec2	Haemophilus influenzae Rd KW20	51.832	96.101	0.498