NT genes of 'Lonepinella sp. MS14435'
In this species, transformation by exogenous DNA is regulated by the presence of a specific Uptake Signal Sequence (USS) (PMID: 17038178).
| Gene name | Gene type | Function | Related MGE | Organism | Genome accession | Locus tag | Protein ID |
|---|---|---|---|---|---|---|---|
 ssb |
Machinery gene | DNA processing | - | Lonepinella sp. MS14435 | NZ_CP169368 | O1Q80_RS00175 | WP_386694983.1 |
| comM |
Machinery gene | Involve in natural transformation | - | Lonepinella sp. MS14435 | NZ_CP169368 | O1Q80_RS00655 | WP_386696115.1 |
| dprA |
Machinery gene | DNA processing | - | Lonepinella sp. MS14435 | NZ_CP169368 | O1Q80_RS01560 | WP_386695251.1 |
| recA |
Machinery gene | Homologous recombination | - | Lonepinella sp. MS14435 | NZ_CP169368 | O1Q80_RS01585 | WP_386695261.1 |
| comE1/comEA |
Machinery gene | DNA binding and uptake | - | Lonepinella sp. MS14435 | NZ_CP169368 | O1Q80_RS03825 | WP_386695769.1 |
| comN |
Machinery gene | DNA binding and uptake | - | Lonepinella sp. MS14435 | NZ_CP169368 | O1Q80_RS04510 | WP_386695939.1 |
| comQ |
Machinery gene | DNA binding and uptake | - | Lonepinella sp. MS14435 | NZ_CP169368 | O1Q80_RS04525 | WP_386695942.1 |
| ceuB |
Machinery gene | DNA binding and uptake | - | Lonepinella sp. MS14435 | NZ_CP169368 | O1Q80_RS06245 | WP_386685906.1 |
| rec2 |
Machinery gene | DNA binding and uptake | Prophage | Lonepinella sp. MS14435 | NZ_CP169368 | O1Q80_RS07490 | WP_386694090.1 |
| pilF/pilF2 |
Machinery gene | DNA binding and uptake | - | Lonepinella sp. MS14435 | NZ_CP169368 | O1Q80_RS08805 | WP_386687064.1 |
| pilC |
Machinery gene | DNA binding and uptake | - | Lonepinella sp. MS14435 | NZ_CP169368 | O1Q80_RS09365 | WP_386687254.1 |
| pilB |
Machinery gene | DNA binding and uptake | - | Lonepinella sp. MS14435 | NZ_CP169368 | O1Q80_RS09370 | WP_386694672.1 |
| pilA |
Machinery gene | DNA binding and uptake | - | Lonepinella sp. MS14435 | NZ_CP169368 | O1Q80_RS09375 | WP_386694674.1 |
| comE |
Machinery gene | DNA binding and uptake | - | Lonepinella sp. MS14435 | NZ_CP169368 | O1Q80_RS09685 | WP_386694756.1 |
Experimentally validated
Bioinformatically predicted