Detailed information NTG1051028

Bioinformatically predicted

Overview

• Name: rec2
• Type: Machinery gene
• Locus tag: O1Q80_RS07490
• Genome accession: NZ_CP169368
• Coordinates: 1569270..1571657 (-)
• Length: 795 a.a.
• NCBI ID: WP_386694090.1
• Uniprot ID: -
• Organism: Lonepinella sp. MS14435
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Prophage	1567461..1581901	1569270..1571657	within	0

Gene organization within MGE regions

Location: 1567461..1581901

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
O1Q80_RS07485 (O1Q80_01492)	msbA	1567461..1569209 (-)	1749	WP_386694088.1	lipid A ABC transporter ATP-binding protein/permease MsbA	-
O1Q80_RS07490 (O1Q80_01493)	rec2	1569270..1571657 (-)	2388	WP_386694090.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
O1Q80_RS07495 (O1Q80_01494)	dksA	1571946..1572392 (+)	447	WP_386686474.1	RNA polymerase-binding protein DksA	-
O1Q80_RS07500 (O1Q80_01495)	pcnB	1572669..1573925 (+)	1257	WP_386694093.1	polynucleotide adenylyltransferase PcnB	-
O1Q80_RS07505 (O1Q80_01496)	folK	1573929..1574417 (+)	489	WP_386694096.1	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	-
O1Q80_RS07510 (O1Q80_01497)	-	1574659..1576587 (+)	1929	WP_386694098.1	ABC transporter ATP-binding protein	-
O1Q80_RS07515 (O1Q80_01498)	-	1576876..1577250 (+)	375	WP_386694100.1	type II toxin-antitoxin system RelE/ParE family toxin	-
O1Q80_RS07520 (O1Q80_01499)	-	1577250..1577558 (+)	309	WP_386694103.1	helix-turn-helix domain-containing protein	-
O1Q80_RS07525 (O1Q80_01500)	parE	1577690..1579639 (+)	1950	WP_386694106.1	DNA topoisomerase IV subunit B	-
O1Q80_RS07530 (O1Q80_01501)	parC	1579652..1581901 (+)	2250	WP_386694109.1	DNA topoisomerase IV subunit A	-

Sequence

Protein

• Length: 795 a.a.
• Molecular weight: 91144.80 Da
• Isoelectric Point: 9.4075

>NTDB_id=1051028 O1Q80_RS07490 WP_386694090.1 1569270..1571657(-) (rec2) [Lonepinella sp. MS14435]
MQRILELIRQLDIDEVAFCAILSVLSLYFLPERFLFCWQLCLLLFSLLLILRLVIKKTQFIIKWINSILILLVFIGYAHF
IALNSLQQAQIFPQKIQTTFRIVEIHHQGDYQSLVLQTEQPNRRIYATWKVAQSPKLGELWQGELQLRPISSRLNISGFD
RQIWYFAKDIQAWGTVKSAVKIAQDFSWREQCLADSLMQTQGLTQQGLLLALGFGERAWLNPDTWKIYQQTNTAHLIAIS
GLHIGLAMALGFCFGRVVQYMLPTPKITPIFPLCCGVVSALFYANLAGFAIPTLRASIALLILILLHFYRAYCTAWQLYF
RVVALLLLYDPLMILSTSFWLSIGAVGCLILWYQLFPLHLLRWRGLPLSPKVRWILALFHLQLGLFCLFTPIQLAFFNGF
SLQGFWANLLIVPLYSFLLVPVVLFAVFSNGSLYSWRLADFVADKITDLLSLFQQGWLSLSYLQSAYFNILLAFLIWGML
YKIYTSNRKNVSYHKKPRCFSLKSDRSLSPILYARVQKGILLFILANGLQPLWHYFYQSDWQIDTLDVGQGLATLIMKNQ
RGILYDTGASWQGGSMAELEIIPYLQRQGITLDYLIISHDDNDHAGGARAILQAFPQAMLVSPSQKNYSEKHRTFCQAEK
QWLWQGIQIKVLSPKQIVERADNFHSCVLWLEKDKHSLLLTGDADIATERQISPLLNKVEVLQVGHHGSKTSTGQGLVNK
LQPDIALISSGRWNPWHFPNRSVMERLQQTQSAVYNTAISGQISVRFYAEQTKVVTARNAFSPWYQQIIDVQYSD

Nucleotide

• Length: 2388 bp

>NTDB_id=1051028 O1Q80_RS07490 WP_386694090.1 1569270..1571657(-) (rec2) [Lonepinella sp. MS14435]
ATGCAGAGAATATTGGAATTAATCCGTCAATTAGATATAGATGAAGTTGCTTTTTGTGCGATTTTATCTGTGTTGTCTTT
GTATTTTCTACCTGAAAGATTTTTATTCTGTTGGCAACTTTGTTTACTTTTATTTTCCCTTTTGCTCATCTTGCGACTGG
TGATCAAAAAAACACAATTTATTATAAAATGGATTAACAGCATATTGATTCTATTAGTATTTATTGGTTATGCTCATTTC
ATTGCTCTGAATTCCTTACAACAAGCCCAAATTTTCCCACAAAAAATTCAAACCACTTTTCGTATTGTGGAAATTCATCA
TCAGGGAGATTATCAATCTTTGGTATTGCAAACTGAACAACCCAACAGACGAATTTATGCAACTTGGAAAGTGGCTCAAT
CTCCCAAATTAGGTGAATTGTGGCAAGGCGAATTACAACTTAGACCAATTTCATCTCGCCTAAATATCAGTGGCTTTGAT
CGACAAATATGGTATTTTGCCAAAGATATTCAAGCATGGGGAACGGTAAAAAGTGCGGTGAAAATTGCACAAGATTTTTC
TTGGCGAGAACAGTGTTTGGCGGACAGTTTGATGCAAACGCAAGGATTAACACAGCAAGGATTATTATTAGCCTTAGGGT
TTGGTGAACGGGCTTGGTTAAATCCCGATACGTGGAAAATTTATCAGCAAACTAATACTGCTCATCTCATTGCTATTTCG
GGGTTGCATATTGGTTTGGCGATGGCTCTTGGTTTTTGTTTCGGGCGAGTGGTGCAATATATGTTACCCACTCCAAAAAT
TACCCCGATTTTTCCTTTATGTTGTGGTGTTGTATCAGCCTTATTTTATGCTAACTTAGCGGGGTTCGCTATTCCTACAT
TGCGAGCTAGTATAGCATTATTGATTTTGATCTTATTGCATTTTTATCGAGCTTATTGTACCGCTTGGCAACTGTATTTT
CGTGTTGTTGCATTATTATTACTCTACGATCCATTGATGATTTTATCCACCAGTTTCTGGTTATCAATCGGTGCGGTGGG
TTGTTTAATTTTGTGGTATCAACTTTTTCCATTGCATTTACTTAGATGGCGAGGTTTACCGTTATCTCCCAAAGTGCGGT
GGATTTTGGCATTGTTTCATTTGCAACTGGGGTTATTTTGCTTATTTACCCCAATTCAATTAGCCTTTTTCAATGGTTTT
TCCTTGCAAGGTTTTTGGGCGAATTTATTGATCGTCCCCTTATACAGTTTTTTGCTTGTGCCAGTCGTTTTATTTGCAGT
GTTTAGCAATGGTAGTTTGTATAGTTGGCGACTGGCGGATTTCGTTGCCGATAAGATTACGGATTTATTATCTTTGTTTC
AACAGGGTTGGTTAAGTTTATCTTATTTGCAGAGTGCTTATTTTAATATCCTACTAGCTTTTTTAATATGGGGAATGTTG
TATAAAATCTATACTTCGAATAGGAAAAATGTAAGTTATCACAAAAAACCACGTTGTTTTTCCTTAAAATCCGATCGTAG
TTTATCACCAATACTTTATGCTCGAGTACAAAAAGGCATCTTATTGTTCATATTGGCAAATGGACTACAACCTTTATGGC
ATTATTTTTATCAATCTGACTGGCAAATAGATACCCTTGATGTCGGACAAGGATTAGCCACCTTAATCATGAAAAATCAA
CGGGGGATTTTGTACGATACTGGGGCAAGCTGGCAAGGGGGAAGTATGGCTGAACTGGAAATTATTCCGTATTTACAACG
ACAAGGCATTACTTTAGATTATCTGATTATTAGTCATGATGATAACGATCATGCTGGCGGTGCAAGAGCAATATTACAAG
CATTTCCACAAGCAATGTTGGTAAGCCCTTCACAAAAAAACTATAGCGAAAAACACCGCACTTTTTGCCAAGCAGAAAAA
CAATGGCTGTGGCAAGGCATACAAATTAAAGTGTTATCGCCAAAGCAAATTGTAGAAAGGGCAGATAATTTTCATTCTTG
TGTATTATGGTTGGAAAAAGATAAACATAGCTTGTTGCTAACAGGGGATGCGGATATTGCTACAGAACGACAAATTTCAC
CTTTACTAAATAAAGTAGAAGTGTTGCAAGTTGGGCATCATGGTAGTAAGACCTCTACAGGGCAGGGATTGGTTAATAAG
CTACAACCTGACATTGCGTTAATTTCCAGTGGTCGTTGGAATCCGTGGCACTTTCCAAATAGATCTGTTATGGAACGTTT
ACAGCAAACTCAAAGTGCGGTGTATAACACGGCAATTTCAGGGCAAATTTCGGTGCGATTTTATGCAGAACAAACAAAAG
TTGTAACCGCCAGAAATGCTTTTAGTCCTTGGTATCAACAGATTATTGATGTTCAATATAGTGATTAA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (38-179)

• Metallo-beta-lactamase superfamily (Lactamase_B) (547-729)

• Competence protein (Competence) (212-480)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rec2	Haemophilus influenzae Rd KW20	52.094	96.101	0.501