Detailed information
Bioinformatically predicted
Overview
| Name | comE1/comEA | Type | Machinery gene |
| Locus tag | O1Q80_RS03825 | Genome accession | NZ_CP169368 |
| Coordinates | 810097..810450 (+) | Length | 117 a.a. |
| NCBI ID | WP_386695769.1 | Uniprot ID | - |
| Organism | Lonepinella sp. MS14435 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 805097..815450
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| O1Q80_RS03795 (O1Q80_00758) | - | 805623..806012 (-) | 390 | WP_386692512.1 | type II toxin-antitoxin system VapC family toxin | - |
| O1Q80_RS03800 (O1Q80_00759) | - | 806009..806260 (-) | 252 | WP_386689496.1 | antitoxin | - |
| O1Q80_RS03805 (O1Q80_00760) | hisB | 806336..807430 (-) | 1095 | WP_386695763.1 | bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB | - |
| O1Q80_RS03810 (O1Q80_00761) | dauA | 807459..809204 (-) | 1746 | WP_386695765.1 | C4-dicarboxylic acid transporter DauA | - |
| O1Q80_RS03820 (O1Q80_00763) | - | 809544..809804 (+) | 261 | WP_386695767.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| O1Q80_RS03825 (O1Q80_00764) | comE1/comEA | 810097..810450 (+) | 354 | WP_386695769.1 | ComEA family DNA-binding protein | Machinery gene |
| O1Q80_RS03830 (O1Q80_00765) | - | 810545..810817 (+) | 273 | WP_386689508.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| O1Q80_RS03835 (O1Q80_00766) | purN | 810862..811500 (-) | 639 | WP_386695771.1 | phosphoribosylglycinamide formyltransferase | - |
| O1Q80_RS03840 (O1Q80_00767) | purM | 811557..812594 (-) | 1038 | WP_386695773.1 | phosphoribosylformylglycinamidine cyclo-ligase | - |
| O1Q80_RS03845 (O1Q80_00768) | - | 812753..814108 (-) | 1356 | WP_386696140.1 | sodium-dependent transporter | - |
| O1Q80_RS03850 (O1Q80_00769) | - | 814203..814865 (-) | 663 | WP_386689515.1 | YtjB family periplasmic protein | - |
Sequence
Protein
Download Length: 117 a.a. Molecular weight: 12246.94 Da Isoelectric Point: 7.0098
>NTDB_id=1051021 O1Q80_RS03825 WP_386695769.1 810097..810450(+) (comE1/comEA) [Lonepinella sp. MS14435]
MKSIKALFGTVVLAGSLLGSANVFAETAQPATTPVQQVTAQTVATETQATVVGDKLNINTASATEIQKALTGIGTKKAEA
IVQYRETHGAFTSVDQLLDVQGIGQATLDKNKDRIIF
MKSIKALFGTVVLAGSLLGSANVFAETAQPATTPVQQVTAQTVATETQATVVGDKLNINTASATEIQKALTGIGTKKAEA
IVQYRETHGAFTSVDQLLDVQGIGQATLDKNKDRIIF
Nucleotide
Download Length: 354 bp
>NTDB_id=1051021 O1Q80_RS03825 WP_386695769.1 810097..810450(+) (comE1/comEA) [Lonepinella sp. MS14435]
ATGAAATCCATTAAAGCATTATTCGGCACAGTGGTACTAGCTGGCTCATTATTAGGCAGTGCAAACGTATTCGCAGAAAC
CGCACAACCAGCCACAACACCCGTTCAGCAAGTTACTGCACAAACGGTTGCAACTGAAACACAAGCTACTGTAGTTGGTG
ATAAATTAAATATTAACACCGCTTCCGCCACAGAAATTCAAAAAGCCTTAACGGGGATCGGAACTAAAAAAGCTGAAGCC
ATTGTGCAATATCGTGAAACGCATGGTGCTTTCACTTCCGTAGATCAATTATTAGACGTACAGGGTATTGGTCAAGCTAC
TTTAGATAAAAATAAAGATCGGATTATTTTCTAG
ATGAAATCCATTAAAGCATTATTCGGCACAGTGGTACTAGCTGGCTCATTATTAGGCAGTGCAAACGTATTCGCAGAAAC
CGCACAACCAGCCACAACACCCGTTCAGCAAGTTACTGCACAAACGGTTGCAACTGAAACACAAGCTACTGTAGTTGGTG
ATAAATTAAATATTAACACCGCTTCCGCCACAGAAATTCAAAAAGCCTTAACGGGGATCGGAACTAAAAAAGCTGAAGCC
ATTGTGCAATATCGTGAAACGCATGGTGCTTTCACTTCCGTAGATCAATTATTAGACGTACAGGGTATTGGTCAAGCTAC
TTTAGATAAAAATAAAGATCGGATTATTTTCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comE1/comEA | Haemophilus influenzae Rd KW20 |
60.526 |
97.436 |
0.59 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
51.961 |
87.179 |
0.453 |