Escherichia coli strain 5-11

TA loci of Escherichia coli strain 5-1

Number of TA loci: experimental0; insolico24

TA ID Related MGEs Organism (replicon) Genome accession Toxin Antitoxin Family/Domain
in_silico TA228275 - Escherichia coli strain 5-1 (chromosome) NZ_CP089445 LT922_RS02400 (chpB) LT922_RS02395 (chpS) chpSB/PRK09812-ChpS
in_silico TA228277 - Escherichia coli strain 5-1 (chromosome) NZ_CP089445 LT922_RS03340 (shpA) LT922_RS03345 (shpB) shpAB/BrnT-BrnA
in_silico TA228278 - Escherichia coli strain 5-1 (chromosome) NZ_CP089445 LT922_RS03875 (ccdB) LT922_RS03870 (ccdA) ccdAB/CcdA(antitoxin)
in_silico TA228279 GI Escherichia coli strain 5-1 (chromosome) NZ_CP089445 LT922_RS05165 (mosT) LT922_RS05160 (mosA) mosAT/AbiEii-AbiEi
in_silico TA228280 - Escherichia coli strain 5-1 (chromosome) NZ_CP089445 LT922_RS06030 (Hha) LT922_RS06035 (TomB) Hha-TomB/-
in_silico TA228281 - Escherichia coli strain 5-1 (chromosome) NZ_CP089445 LT922_RS06155 (higB) LT922_RS06160 (higA) higBA (relBE)/HigB-HTH_XRE
in_silico TA228286 GI Escherichia coli strain 5-1 (chromosome) NZ_CP089445 LT922_RS11500 (hipA) LT922_RS11505 (hipB) hipBA/HipA-HipB
in_silico TA228296 IS/Tn Escherichia coli strain 5-1 (chromosome) NZ_CP089445 LT922_RS14700 (yoeB) LT922_RS14705 (yefM) yefM-yoeB (relBE)/YoeB-YefM
in_silico TA228297 - Escherichia coli strain 5-1 (chromosome) NZ_CP089445 LT922_RS17555 (rnlA) LT922_RS17550 (rnlB) rnlAB/RnlA-RnlB
in_silico TA228300 - Escherichia coli strain 5-1 (chromosome) NZ_CP089445 LT922_RS20680 (higB) LT922_RS20675 (higA) higBA (relBE)/HigB-HigA
in_silico TA228301 - Escherichia coli strain 5-1 (chromosome) NZ_CP089445 LT922_RS20910 (yhaV) LT922_RS20905 (prlF) prlF-yhaV (relBE)/YhaV-PrlF
in_silico TA228302 - Escherichia coli strain 5-1 (chromosome) NZ_CP089445 LT922_RS22520 (ataT) LT922_RS22525 (ataR) ataRT/DUF1778(antitoxin)
in_silico TA228303 - Escherichia coli strain 5-1 (chromosome) NZ_CP089445 LT922_RS24860 (higB) LT922_RS24865 (higA) higBA (relBE)/HTH(antitoxin)
in_silico TA228307 Plasmid Escherichia coli strain 5-1 (plasmid unnamed2) NZ_CP089447 LT922_RS26230 (vagD) LT922_RS26235 (vagC) vagCD/VapC-VagC
experimentalExperimentally validated     insolicoBioinformatically predicted