MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 125150 bp
Accession: NZ_CP089447 Location: 1..125150 Organism: Escherichia coli strain 5-1 Replicon: plasmid unnamed2
Accession: NZ_CP089447 Location: 1..125150 Organism: Escherichia coli strain 5-1 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LT922_RS25815 (1) | 1..858 | + | 858 | WP_032495102.1 | incFII family plasmid replication initiator RepA | - |
| LT922_RS25820 (1797) | 1797..2450 | + | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| LT922_RS25825 (2543) | 2543..2800 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| LT922_RS25830 (2733) | 2733..3134 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| LT922_RS25835 (3383) | 3383..3798 | + | 416 | Protein_4 | IS1-like element IS1B family transposase | - |
| LT922_RS25840 (3834) | 3834..4379 | - | 546 | Protein_5 | Tn3 family transposase TnpA_Tn3 | Transposase |
| LT922_RS25845 (4445) | 4445..5149 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LT922_RS25850 (5214) | 5214..5804 | + | 591 | Protein_7 | IS91 family transposase ISSbo1 | Transposase |
| LT922_RS25855 (6260) | 6260..6964 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LT922_RS25860 (7030) | 7030..7548 | + | 519 | WP_014839979.1 | FidL-like protein | - |
| LT922_RS25865 (7553) | 7553..7969 | - | 417 | WP_014839980.1 | Metallothiol transferase FosB | ARG |
| LT922_RS25870 (8355) | 8355..9059 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LT922_RS25875 (9110) | 9110..9727 | - | 618 | Protein_12 | IS91 family transposase ISSbo1 | Transposase |
| LT922_RS25880 (9737) | 9737..9925 | - | 189 | WP_000957857.1 | hypothetical protein | - |
| LT922_RS25885 (10017) | 10017..10553 | + | 537 | WP_064441864.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| LT922_RS25890 (10736) | 10736..11596 | + | 861 | WP_000027057.1 | hypothetical protein | ARG |
| LT922_RS25895 (11766) | 11766..12521 | + | 756 | WP_012372818.1 | hypothetical protein | ARG |
| LT922_RS25900 (12602) | 12602..12916 | - | 315 | Protein_17 | hypothetical protein | - |
| LT922_RS25905 (12971) | 12971..13675 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| LT922_RS25910 (15255) | 15255..15489 | + | 235 | Protein_19 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LT922_RS25915 (15617) | 15617..15820 | + | 204 | Protein_20 | hypothetical protein | - |
| LT922_RS25920 (16021) | 16021..16371 | - | 351 | WP_000361389.1 | plasmid partitioning/stability family protein | - |
| LT922_RS25925 (16374) | 16374..17336 | - | 963 | WP_000959884.1 | plasmid segregation protein ParM | - |
| LT922_RS25930 (17483) | 17483..17776 | + | 294 | WP_032146011.1 | hypothetical protein | - |
| LT922_RS25935 (17853) | 17853..18536 | + | 684 | WP_000085883.1 | DNA methylase | - |
| LT922_RS25940 (18537) | 18537..18758 | + | 222 | WP_001104881.1 | hypothetical protein | - |
| LT922_RS25945 (18772) | 18772..19206 | + | 435 | WP_000274503.1 | DUF1380 family protein | - |
| LT922_RS25950 (19257) | 19257..20033 | + | 777 | WP_001383963.1 | hypothetical protein | - |
| LT922_RS25955 (20451) | 20451..20876 | + | 426 | WP_001198928.1 | antirestriction protein | - |
| LT922_RS25960 (20923) | 20923..21345 | + | 423 | WP_000271762.1 | DUF1380 family protein | - |
| LT922_RS25965 (21342) | 21342..21533 | + | 192 | WP_001027493.1 | hypothetical protein | - |
| LT922_RS25970 (21847) | 21847..23514 | - | 1668 | WP_012372796.1 | group II intron reverse transcriptase/maturase | - |
| LT922_RS25975 (24243) | 24243..24397 | - | 155 | Protein_32 | hypothetical protein | - |
| LT922_RS25980 (24914) | 24914..25144 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| LT922_RS25985 (25196) | 25196..26557 | + | 1362 | WP_000170695.1 | DUF3560 domain-containing protein | - |
| LT922_RS25990 (26604) | 26604..27167 | + | 564 | WP_001298559.1 | class I SAM-dependent methyltransferase | - |
| LT922_RS25995 (27253) | 27253..27708 | - | 456 | Protein_36 | hypothetical protein | - |
| LT922_RS26000 (28010) | 28010..28537 | + | 528 | WP_000290834.1 | single-stranded DNA-binding protein | - |
| LT922_RS26005 (28595) | 28595..28828 | + | 234 | WP_000006003.1 | DUF905 family protein | - |
| LT922_RS26010 (28889) | 28889..30912 | + | 2024 | Protein_39 | ParB/RepB/Spo0J family partition protein | - |
| LT922_RS26015 (30981) | 30981..31415 | + | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| LT922_RS26020 (31412) | 31412..32174 | + | 763 | Protein_41 | plasmid SOS inhibition protein A | - |
| LT922_RS26025 (32152) | 32152..32331 | - | 180 | WP_001309233.1 | hypothetical protein | - |
| - (32143) | 32143..32367 | + | 225 | NuclAT_0 | - | - |
| - (32143) | 32143..32367 | + | 225 | NuclAT_0 | - | - |
| - (32143) | 32143..32367 | + | 225 | NuclAT_0 | - | - |
| - (32143) | 32143..32367 | + | 225 | NuclAT_0 | - | - |
| LT922_RS26030 (32353) | 32353..32502 | + | 150 | Protein_43 | plasmid maintenance protein Mok | - |
| LT922_RS26035 (32444) | 32444..32569 | + | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| LT922_RS26040 (32888) | 32888..33184 | - | 297 | Protein_45 | hypothetical protein | - |
| LT922_RS26045 (33535) | 33535..34239 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LT922_RS26050 (34302) | 34302..34697 | + | 396 | Protein_47 | ATP-dependent endonuclease | - |
| LT922_RS26055 (34682) | 34682..35704 | + | 1023 | WP_000361404.1 | helicase UvrD | - |
| LT922_RS26060 (35960) | 35960..36657 | + | 698 | WP_223174630.1 | IS1 family transposase ISKpn14 | Transposase |
| LT922_RS26065 (36686) | 36686..36958 | + | 273 | Protein_50 | transposase | - |
| LT922_RS26070 (37238) | 37238..38242 | - | 1005 | WP_000427619.1 | IS110 family transposase IS5075 | Transposase |
| LT922_RS26075 (38321) | 38321..38755 | - | 435 | WP_000429836.1 | IS607 family transposase ISChh1 | Transposase |
| LT922_RS26080 (38827) | 38827..39177 | + | 351 | WP_001294663.1 | mercuric transport protein MerT | - |
| LT922_RS26085 (39191) | 39191..39466 | + | 276 | WP_000732292.1 | mercury resistance system periplasmic binding protein MerP | - |
| LT922_RS26090 (39502) | 39502..39924 | + | 423 | WP_001340589.1 | organomercurial transporter MerC | - |
| LT922_RS26095 (39976) | 39976..41670 | + | 1695 | WP_000105636.1 | mercury(II) reductase | - |
| LT922_RS26100 (41688) | 41688..42050 | + | 363 | WP_001277456.1 | mercury resistance co-regulator MerD | - |
| LT922_RS26105 (42047) | 42047..42283 | + | 237 | WP_000993386.1 | broad-spectrum mercury transporter MerE | - |
| LT922_RS26110 (42319) | 42319..42987 | + | 669 | WP_001300294.1 | hypothetical protein | VF |
| LT922_RS26115 (43062) | 43062..44234 | + | 1173 | Protein_60 | transposase | - |
| LT922_RS26120 (44299) | 44299..45003 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LT922_RS26125 (45055) | 45055..45516 | + | 462 | Protein_62 | Tn3 family transposase TnpR_Tn3 | Transposase |
| LT922_RS26130 (45639) | 45639..46619 | + | 981 | WP_013213985.1 | IS481 family transposase ISKpn27 | Transposase |
| LT922_RS26135 (46895) | 46895..47776 | + | 882 | WP_004199234.1 | hypothetical protein | ARG |
| LT922_RS26140 (48026) | 48026..48907 | - | 882 | Protein_65 | IS1182 family transposase ISKpn6 | Transposase |
| LT922_RS26145 (49011) | 49011..49307 | - | 297 | WP_013213987.1 | transcriptional regulator | - |
| LT922_RS26150 (49353) | 49353..49508 | - | 156 | WP_013213988.1 | hypothetical protein | - |
| LT922_RS26155 (49636) | 49636..50061 | - | 426 | WP_013213989.1 | antirestriction protein | - |
| LT922_RS26160 (50172) | 50172..50450 | - | 279 | WP_013213990.1 | hypothetical protein | - |
| LT922_RS26165 (50984) | 50984..51601 | - | 618 | Protein_70 | replication protein | - |
| LT922_RS26170 (51993) | 51993..52553 | + | 561 | WP_001161490.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| LT922_RS26175 (52557) | 52557..55523 | + | 2967 | WP_001138014.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| LT922_RS26180 (55559) | 55559..55627 | - | 69 | Protein_73 | IS6 family transposase | - |
| LT922_RS26185 (55764) | 55764..56624 | + | 861 | WP_002904004.1 | hypothetical protein | ARG |
| LT922_RS26190 (56645) | 56645..57406 | - | 762 | WP_002210513.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| LT922_RS26195 (57668) | 57668..58570 | + | 903 | WP_002903955.1 | NAD(P)-dependent oxidoreductase | - |
| LT922_RS26200 (58582) | 58582..59834 | + | 1253 | Protein_77 | four-carbon acid sugar kinase family protein | - |
| LT922_RS26205 (59827) | 59827..60150 | + | 324 | Protein_78 | class II aldolase/adducin family protein | - |
| LT922_RS26210 (60204) | 60204..60908 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LT922_RS26215 (60972) | 60972..61256 | - | 285 | Protein_80 | PAS domain-containing protein | - |
| LT922_RS26220 (61322) | 61322..62026 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LT922_RS26225 (62076) | 62076..63254 | - | 1179 | Protein_82 | AAA family ATPase | - |
| LT922_RS26230 (63328) | 63328..63744 | - | 417 | WP_001044770.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| LT922_RS26235 (63741) | 63741..63971 | - | 231 | WP_001261282.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| LT922_RS26240 (63928) | 63928..64389 | + | 462 | WP_014343465.1 | hypothetical protein | - |
| LT922_RS26245 (64550) | 64550..65494 | + | 945 | WP_011977810.1 | hypothetical protein | - |
| LT922_RS26250 (65531) | 65531..65923 | + | 393 | WP_011977811.1 | hypothetical protein | - |
| LT922_RS26255 (65981) | 65981..66502 | + | 522 | WP_013214008.1 | hypothetical protein | - |
| LT922_RS26260 (66548) | 66548..66751 | + | 204 | WP_011977813.1 | hypothetical protein | - |
| LT922_RS26265 (66781) | 66781..67785 | + | 1005 | WP_011977814.1 | hypothetical protein | - |
| LT922_RS26270 (67969) | 67969..68748 | + | 780 | WP_013214009.1 | site-specific integrase | - |
| LT922_RS26275 (68794) | 68794..69051 | - | 258 | WP_013214010.1 | hypothetical protein | - |
| LT922_RS26280 (69180) | 69180..69293 | - | 114 | WP_014343462.1 | hypothetical protein | - |
| LT922_RS26285 (69829) | 69829..70695 | + | 867 | WP_004118283.1 | replication initiation protein | - |
| LT922_RS26290 (71805) | 71805..73010 | + | 1206 | WP_011977818.1 | AAA family ATPase | - |
| LT922_RS26295 (73010) | 73010..73984 | + | 975 | WP_011977819.1 | ParB family protein | - |
| LT922_RS26300 (74066) | 74066..75337 | - | 1272 | WP_013214011.1 | Y-family DNA polymerase | - |
| LT922_RS26305 (75337) | 75337..75768 | - | 432 | WP_001568036.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| LT922_RS26310 (76175) | 76175..77662 | + | 1488 | WP_004178082.1 | group II intron reverse transcriptase/maturase | - |
| LT922_RS26315 (77911) | 77911..78882 | + | 972 | WP_004152353.1 | plasmid segregation protein ParM | - |
| LT922_RS26320 (78885) | 78885..79556 | + | 672 | WP_013214012.1 | plasmid partitioning/stability family protein | - |
| LT922_RS26325 (79619) | 79619..79849 | + | 231 | WP_001568040.1 | hypothetical protein | - |
| LT922_RS26330 (80045) | 80045..80214 | + | 170 | Protein_103 | hypothetical protein | - |
| LT922_RS26335 (80286) | 80286..80987 | + | 702 | WP_001568041.1 | DNA methylase | - |
| LT922_RS26340 (80987) | 80987..81208 | + | 222 | WP_001568042.1 | hypothetical protein | - |
| LT922_RS26345 (81218) | 81218..81637 | + | 420 | WP_001568043.1 | DUF1380 domain-containing protein | - |
| LT922_RS26350 (81691) | 81691..82458 | + | 768 | WP_013214013.1 | hypothetical protein | - |
| LT922_RS26355 (83139) | 83139..83567 | + | 429 | WP_001568045.1 | antirestriction protein | - |
| LT922_RS26360 (83610) | 83610..84116 | + | 507 | WP_013214014.1 | antirestriction protein ArdA | - |
| LT922_RS26365 (84159) | 84159..84350 | + | 192 | WP_001568047.1 | hypothetical protein | - |
| LT922_RS26370 (84538) | 84538..84792 | + | 255 | WP_011977779.1 | DNA polymerase III subunit theta | - |
| LT922_RS26375 (84827) | 84827..85147 | + | 321 | WP_001568049.1 | hypothetical protein | - |
| LT922_RS26380 (85827) | 85827..86054 | + | 228 | WP_001568050.1 | hypothetical protein | - |
| LT922_RS26385 (86146) | 86146..86376 | + | 231 | WP_001568051.1 | hypothetical protein | - |
| LT922_RS26390 (86428) | 86428..87783 | + | 1356 | WP_014343515.1 | DUF3560 domain-containing protein | - |
| LT922_RS26395 (87831) | 87831..88394 | + | 564 | WP_014343514.1 | methyltransferase | - |
| LT922_RS26400 (89227) | 89227..89769 | + | 543 | WP_014343512.1 | single-stranded DNA-binding protein | - |
| LT922_RS26405 (89818) | 89818..90066 | + | 249 | WP_001568055.1 | DUF905 domain-containing protein | - |
| LT922_RS26410 (90136) | 90136..92193 | + | 2058 | WP_015493064.1 | ParB/RepB/Spo0J family partition protein | - |
| LT922_RS26415 (92238) | 92238..92669 | + | 432 | WP_001568057.1 | conjugation system SOS inhibitor PsiB | - |
| LT922_RS26420 (92666) | 92666..93394 | + | 729 | WP_001568058.1 | plasmid SOS inhibition protein A | - |
| LT922_RS26425 (93391) | 93391..93717 | + | 327 | WP_013023807.1 | hypothetical protein | - |
| LT922_RS26430 (93773) | 93773..94147 | + | 375 | WP_014343510.1 | hypothetical protein | - |
| LT922_RS26435 (94317) | 94317..94469 | + | 153 | WP_004150508.1 | DUF5431 family protein | - |
| LT922_RS26440 (94414) | 94414..94533 | + | 120 | WP_159376494.1 | type I toxin-antitoxin system Hok family toxin | - |
| LT922_RS26445 (95226) | 95226..95498 | + | 273 | WP_040245921.1 | hypothetical protein | - |
| LT922_RS26450 (95495) | 95495..95845 | + | 351 | WP_040245917.1 | hypothetical protein | - |
| LT922_RS26455 (95860) | 95860..96177 | + | 318 | WP_014343505.1 | hypothetical protein | - |
| LT922_RS26460 (97018) | 97018..97374 | + | 357 | WP_014343501.1 | hypothetical protein | - |
| LT922_RS26465 (97435) | 97435..97647 | + | 213 | WP_014343500.1 | hypothetical protein | - |
| LT922_RS26470 (97658) | 97658..97882 | + | 225 | WP_014343499.1 | hypothetical protein | - |
| LT922_RS26475 (97963) | 97963..98283 | + | 321 | WP_014343498.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LT922_RS26480 (98273) | 98273..98551 | + | 279 | WP_004152721.1 | helix-turn-helix transcriptional regulator | - |
| LT922_RS26485 (98555) | 98555..98659 | + | 105 | Protein_134 | transcriptional regulator | - |
| LT922_RS26490 (99488) | 99488..100309 | + | 822 | WP_004152492.1 | DUF932 domain-containing protein | - |
| LT922_RS26495 (100342) | 100342..100671 | + | 330 | WP_013214015.1 | DUF5983 family protein | - |
| LT922_RS26500 (100704) | 100704..101189 | - | 486 | WP_014343495.1 | hypothetical protein | VF |
| LT922_RS26505 (101580) | 101580..101996 | + | 417 | WP_014343494.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| LT922_RS26510 (102196) | 102196..102933 | + | 738 | WP_013214018.1 | conjugal transfer protein TrbJ | - |
| LT922_RS26515 (103048) | 103048..103254 | + | 207 | WP_171773970.1 | TraY domain-containing protein | - |
| LT922_RS26520 (103316) | 103316..103663 | + | 348 | WP_094623447.1 | type IV conjugative transfer system pilin TraA | - |
| LT922_RS26525 (103697) | 103697..104401 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LT922_RS26530 (104465) | 104465..106618 | + | 2154 | Protein_143 | Tn3 family transposase TnpA_ISPa38 | Transposase |
| LT922_RS26535 (106697) | 106697..107701 | + | 1005 | WP_000427619.1 | IS110 family transposase IS5075 | Transposase |
| LT922_RS26540 (107973) | 107973..108059 | - | 87 | Protein_145 | Arm DNA-binding domain-containing protein | - |
| LT922_RS26545 (108181) | 108181..108405 | - | 225 | WP_000743213.1 | hypothetical protein | - |
| LT922_RS26550 (108402) | 108402..109139 | - | 738 | WP_001446887.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| LT922_RS26555 (109625) | 109625..109765 | - | 141 | WP_001044210.1 | hypothetical protein | - |
| LT922_RS26560 (109771) | 109771..110475 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LT922_RS26565 (110555) | 110555..111055 | + | 501 | WP_001239317.1 | hypothetical protein | - |
| LT922_RS26570 (111205) | 111205..111846 | + | 642 | WP_001011939.1 | Chloramphenicol acetyltransferase 2 | ARG |
| LT922_RS26575 (111979) | 111979..112683 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LT922_RS26580 (113152) | 113152..113715 | - | 564 | WP_155082050.1 | hypothetical protein | - |
| LT922_RS26585 (113837) | 113837..114379 | - | 543 | WP_077273850.1 | restriction endonuclease | - |
| LT922_RS26590 (114361) | 114361..115341 | - | 981 | WP_000019445.1 | IS5 family transposase ISKpn26 | Transposase |
| LT922_RS26595 (115410) | 115410..115802 | + | 393 | Protein_156 | 3'-5' exonuclease | - |
| LT922_RS26600 (115855) | 115855..116250 | + | 396 | WP_015493087.1 | hypothetical protein | - |
| LT922_RS26605 (116247) | 116247..116858 | + | 612 | WP_015493086.1 | DUF2913 family protein | - |
| LT922_RS26610 (116855) | 116855..117805 | - | 951 | WP_015493085.1 | Recombination-promoting nuclease RpnA | VF |
| LT922_RS26615 (118134) | 118134..118838 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LT922_RS26620 (118890) | 118890..119711 | - | 822 | Protein_161 | Tn3 family transposase TnpA_ISPa38 | Transposase |
| LT922_RS26625 (119714) | 119714..119779 | - | 66 | Protein_162 | helix-turn-helix domain-containing protein | - |
| LT922_RS26630 (119832) | 119832..120536 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LT922_RS26635 (120561) | 120561..120761 | + | 201 | WP_072354025.1 | hypothetical protein | - |
| LT922_RS26640 (120781) | 120781..121527 | + | 747 | WP_000205770.1 | conjugal transfer pilus acetylase TraX | - |
| LT922_RS26645 (121582) | 121582..122142 | + | 561 | WP_000139328.1 | fertility inhibition protein FinO | - |
| LT922_RS26650 (122274) | 122274..122474 | + | 201 | WP_015059022.1 | hypothetical protein | - |
| LT922_RS26655 (122860) | 122860..123459 | + | 600 | WP_032083981.1 | PIN domain-containing protein | - |
| LT922_RS26660 (123521) | 123521..123853 | + | 333 | WP_152916585.1 | hypothetical protein | - |
| - (124054) | 124054..124113 | - | 60 | NuclAT_1 | - | Antitoxin Detail |
| - (124054) | 124054..124113 | - | 60 | NuclAT_1 | - | Antitoxin Detail |
| - (124054) | 124054..124113 | - | 60 | NuclAT_1 | - | Antitoxin Detail |
| - (124054) | 124054..124113 | - | 60 | NuclAT_1 | - | Antitoxin Detail |
| LT922_RS26665 (124158) | 124158..124307 | + | 150 | WP_001312851.1 | Hok/Gef family protein | Toxin Detail |
| LT922_RS26670 (124591) | 124591..124839 | + | 249 | WP_000083837.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|