MGE detailed information
MGE type: Genomic_island MGE length: 48156 bp
Accession: NZ_CP089445 Location: 1063213..1111368 Organism: Escherichia coli strain 5-1 Replicon: chromosome
Accession: NZ_CP089445 Location: 1063213..1111368 Organism: Escherichia coli strain 5-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LT922_RS05115 (1059478) | 1059478..1060581 | + | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| LT922_RS05120 (1060593) | 1060593..1061846 | + | 1254 | WP_000893315.1 | glutamate-5-semialdehyde dehydrogenase | - |
| LT922_RS05130 (1062051) | 1062051..1062254 | - | 204 | Protein_997 | integrase | - |
| LT922_RS05135 (1062400) | 1062400..1062870 | - | 471 | WP_000201175.1 | hypothetical protein | - |
| LT922_RS05140 (1062848) | 1062848..1063006 | - | 159 | WP_071550417.1 | ash family protein | - |
| LT922_RS05145 (1063213) | 1063213..1064460 | - | 1248 | WP_000671528.1 | restriction endonuclease subunit S | - |
| LT922_RS05150 (1064450) | 1064450..1066087 | - | 1638 | WP_000229741.1 | class I SAM-dependent DNA methyltransferase | - |
| LT922_RS05155 (1066081) | 1066081..1069179 | - | 3099 | WP_000673070.1 | type I restriction endonuclease | - |
| LT922_RS05160 (1069463) | 1069463..1070245 | + | 783 | WP_001295795.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| LT922_RS05165 (1070232) | 1070232..1071152 | + | 921 | WP_000365807.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| LT922_RS05170 (1071317) | 1071317..1072093 | - | 777 | WP_000171155.1 | hypothetical protein ; Integrase | Integrase |
| LT922_RS05175 (1072301) | 1072301..1072636 | - | 336 | WP_000996167.1 | Arm DNA-binding domain-containing protein | - |
| LT922_RS05180 (1072863) | 1072863..1073021 | - | 159 | Protein_1007 | integrase | - |
| LT922_RS05185 (1073070) | 1073070..1073255 | + | 186 | WP_000146240.1 | hypothetical protein | - |
| LT922_RS05190 (1073470) | 1073470..1074084 | + | 615 | WP_001019923.1 | YagU family protein | - |
| LT922_RS05195 (1074155) | 1074155..1074321 | + | 167 | Protein_1010 | tail fiber assembly protein | - |
| LT922_RS05200 (1074333) | 1074333..1074662 | - | 330 | WP_001295797.1 | YkgJ family cysteine cluster protein | - |
| LT922_RS05205 (1074969) | 1074969..1075679 | - | 711 | WP_001295798.1 | hypothetical protein | VF |
| LT922_RS05210 (1075648) | 1075648..1077291 | - | 1644 | WP_001265646.1 | hypothetical protein | VF |
| LT922_RS05215 (1077281) | 1077281..1079806 | - | 2526 | WP_001131109.1 | hypothetical protein | VF |
| LT922_RS05220 (1079832) | 1079832..1080500 | - | 669 | WP_000716404.1 | hypothetical protein | VF |
| LT922_RS05225 (1080557) | 1080557..1081144 | - | 588 | WP_000730982.1 | hypothetical protein | VF |
| LT922_RS05230 (1081219) | 1081219..1081761 | - | 543 | WP_000389022.1 | hypothetical protein | VF |
| LT922_RS05235 (1082585) | 1082585..1082810 | + | 226 | Protein_1018 | protein YkgL | - |
| LT922_RS05240 (1082845) | 1082845..1082985 | - | 141 | WP_000866436.1 | type B 50S ribosomal protein L36 | - |
| LT922_RS05245 (1082985) | 1082985..1083248 | - | 264 | WP_000803998.1 | type B 50S ribosomal protein L31 | - |
| LT922_RS05250 (1083613) | 1083613..1083714 | - | 102 | WP_000662258.1 | small membrane protein YkgR | - |
| LT922_RS05255 (1084187) | 1084187..1085329 | - | 1143 | WP_000182343.1 | NADH-dependent flavin oxidoreductase | - |
| LT922_RS05260 (1085502) | 1085502..1086422 | - | 921 | WP_000860035.1 | alpha/beta hydrolase | - |
| LT922_RS05265 (1086579) | 1086579..1087505 | + | 927 | WP_001524125.1 | HTH-type transcriptional regulator ArgP | VF |
| LT922_RS05270 (1087705) | 1087705..1088598 | + | 894 | WP_000910713.1 | HTH-type transcriptional regulator ArgP | VF |
| LT922_RS05275 (1088629) | 1088629..1089618 | - | 990 | WP_001172283.1 | aldo/keto reductase | - |
| LT922_RS05280 (1089645) | 1089645..1090496 | - | 852 | WP_001174452.1 | aldo/keto reductase | - |
| LT922_RS05285 (1091062) | 1091062..1095309 | + | 4248 | WP_000092552.1 | hypothetical protein | VF |
| LT922_RS05290 (1095434) | 1095434..1096291 | - | 858 | WP_000620995.1 | HTH-type transcriptional activator RhaR | VF |
| LT922_RS05295 (1096539) | 1096539..1097408 | + | 870 | WP_001295799.1 | aldo/keto reductase | - |
| LT922_RS05300 (1097568) | 1097568..1098161 | - | 594 | WP_001295800.1 | reactive chlorine species resistance protein RclC | - |
| LT922_RS05305 (1098173) | 1098173..1098409 | - | 237 | WP_000474088.1 | reactive chlorine resistance periplasmic protein RclB | - |
| LT922_RS05310 (1098518) | 1098518..1099843 | - | 1326 | WP_001046304.1 | reactive chlorine resistance oxidoreductase RclA | - |
| LT922_RS05315 (1100070) | 1100070..1100924 | + | 855 | WP_001295801.1 | reactive chlorine-specific transcriptional regulator RclR | - |
| LT922_RS05320 (1101450) | 1101450..1102169 | + | 720 | WP_001102123.1 | (Fe-S)-binding protein | - |
| LT922_RS05325 (1102180) | 1102180..1103607 | + | 1428 | WP_001295802.1 | LutB/LldF family L-lactate oxidation iron-sulfur protein | - |
| LT922_RS05330 (1103600) | 1103600..1104295 | + | 696 | WP_001295803.1 | lactate utilization protein C | - |
| LT922_RS05335 (1104538) | 1104538..1105206 | - | 669 | WP_001005267.1 | protein YkgH | - |
| LT922_RS26685 (1105390) | 1105390..1107681 | - | 2292 | WP_000798065.1 | outer membrane autotransporter HyxB | - |
| LT922_RS05350 (1107723) | 1107723..1108484 | - | 762 | WP_001213045.1 | protein HyxA | - |
| LT922_RS05355 (1108638) | 1108638..1109432 | - | 795 | WP_001295804.1 | LuxR family transcriptional regulator HyxR | - |
| LT922_RS05360 (1109762) | 1109762..1110325 | - | 564 | WP_001295805.1 | Tyrosine recombinase XerD | VF |
| LT922_RS05365 (1111410) | 1111410..1113080 | - | 1671 | WP_001159129.1 | choline dehydrogenase | - |
| LT922_RS05370 (1113094) | 1113094..1114566 | - | 1473 | WP_001295806.1 | betaine-aldehyde dehydrogenase | - |
| LT922_RS05375 (1114580) | 1114580..1115167 | - | 588 | WP_001295807.1 | transcriptional regulator BetI | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|