TAfinder detailed results

Overview

Job ID wrVbGpMxFf
Sequence name NZ_CP026085.1 Escherichia coli strain DH5alpha chromosome, complete genome
Predicted type I

Orphan Toxin (Protein)


Predicted family hokW (T10039) Predicted domain -
Locus tag orf2446 Length 51 a.a.
Coordinates 2583059..2583214 (-)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
orf2434 2578382..2578489 - 108 ORF2434 Predicted ORF by PRODIGAL Version 1.20 -
orf2435 2578663..2578818 - 156 ORF2435 Predicted ORF by PRODIGAL Version 1.20 -
orf2436 2578860..2579237 - 378 ORF2436 Predicted ORF by PRODIGAL Version 1.20 -
orf2437 2579240..2579515 - 276 ORF2437 Predicted ORF by PRODIGAL Version 1.20 -
orf2438 2579505..2579897 - 393 ORF2438 Predicted ORF by PRODIGAL Version 1.20 -
orf2439 2581168..2581704 - 537 ORF2439 Predicted ORF by PRODIGAL Version 1.20 -
orf2440 2581701..2581991 - 291 ORF2440 Predicted ORF by PRODIGAL Version 1.20 -
orf2441 2581991..2582590 - 600 ORF2441 Predicted ORF by PRODIGAL Version 1.20 -
orf2442 2583059..2583214 - 156 ORF2442 Predicted ORF by PRODIGAL Version 1.20 Toxin
orf2443 2583845..2584822 - 978 ORF2443 Predicted ORF by PRODIGAL Version 1.20 -
orf2444 2584819..2585928 - 1110 ORF2444 Predicted ORF by PRODIGAL Version 1.20 -
orf2445 2585921..2587048 - 1128 ORF2445 Predicted ORF by PRODIGAL Version 1.20 -
orf2446 2587232..2587654 - 423 ORF2446 Predicted ORF by PRODIGAL Version 1.20 -

Domains

The domains were predicted by HMMER and were sorted by score.

Orphan Toxin


No domain identified.



Sequences

Orphan Toxin        


Download         Length:         Molecular weight: 5795.96 Da        Isoelectric Point: 7.7951

>ORF2442 Orphan_TA_55 Toxin
MKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFVDYESRE

Download         Length: 156 bp

>ORF2442 Orphan_TA_55 Toxin
TTACTCTCTAGATTCGTAGTCTACGAAGACAGCGACCTCCGTCTGGCCGGTTCGGATTCG
TACCTCGCAGAGGTCTTTCCTCGTTACCAGTGCCGTCACAATGACGGTTAAACAGATGAC
GATCAGGGCGATTAACATCGCCTTTTGCTGCTTCAT

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
T10039 Escherichia coli O157:H7 str. Sakai

96.078

100

0.961
T10209 Escherichia coli strain ECOR24

79.592

98

0.765
T10210 Hafnia alvei

42.857

94.231

0.412
T6324 Escherichia coli

44

96.154

0.431
T6363 uncultured bacterium

44

96.154

0.431
T10208 Escherichia coli C

39.583

96

0.373
T6369 Escherichia coli K-12

42.553

95.918

0.392
T10124 Erwinia amylovora ATCC 49946

55.556

84.375

0.294
T6370 Escherichia coli

33.333

96

0.314