TAfinder detailed results

Overview

Job ID wrVbGpMxFf
Sequence name NZ_CP026085.1 Escherichia coli strain DH5alpha chromosome, complete genome
Predicted type I

Orphan Toxin (Protein)


Predicted family hokW (T10039) Predicted domain -
Locus tag orf2196 Length 51 a.a.
Coordinates 2312419..2312574 (+)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
orf2183 2308692..2308871 + 180 ORF2183 Predicted ORF by PRODIGAL Version 1.20 -
orf2184 2308846..2309028 - 183 ORF2184 Predicted ORF by PRODIGAL Version 1.20 -
orf2185 2309206..2310519 + 1314 ORF2185 Predicted ORF by PRODIGAL Version 1.20 -
orf2186 2310956..2311288 - 333 ORF2186 Predicted ORF by PRODIGAL Version 1.20 -
orf2187 2311821..2312060 + 240 ORF2187 Predicted ORF by PRODIGAL Version 1.20 -
orf2188 2312060..2312347 + 288 ORF2188 Predicted ORF by PRODIGAL Version 1.20 -
orf2189 2312419..2312574 + 156 ORF2189 Predicted ORF by PRODIGAL Version 1.20 Toxin
orf2190 2312791..2313042 + 252 ORF2190 Predicted ORF by PRODIGAL Version 1.20 -
orf2191 2313389..2314438 + 1050 ORF2191 Predicted ORF by PRODIGAL Version 1.20 -
orf2192 2314452..2315204 + 753 ORF2192 Predicted ORF by PRODIGAL Version 1.20 -
orf2193 2315626..2315838 - 213 ORF2193 Predicted ORF by PRODIGAL Version 1.20 -
orf2194 2316139..2316354 + 216 ORF2194 Predicted ORF by PRODIGAL Version 1.20 -
orf2195 2316956..2317075 - 120 ORF2195 Predicted ORF by PRODIGAL Version 1.20 -
orf2196 2317117..2317323 + 207 ORF2196 Predicted ORF by PRODIGAL Version 1.20 -

Domains

The domains were predicted by HMMER and were sorted by score.

Orphan Toxin


No domain identified.



Sequences

Orphan Toxin        


Download         Length:         Molecular weight: 5736.89 Da        Isoelectric Point: 6.1531

>ORF2189 Orphan_TA_46 Toxin
MKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPEE

Download         Length: 156 bp

>ORF2189 Orphan_TA_46 Toxin
ATGAAGCAGCAAAAGGCGATGTTAATCGCCCTGATCGTCATCTGTTTAACCGTCATAGTG
ACGGCACTGGTAACGAGGAAAGACCTCTGCGAGGTACGAATCCGAACCGGCCAGACGGAG
GTCGCTGTCTTCACAGCTTACGAACCTGAGGAGTAA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
T10039 Escherichia coli O157:H7 str. Sakai

92.157

100

0.922
T10209 Escherichia coli strain ECOR24

82

100

0.804
T10210 Hafnia alvei

42.857

94.231

0.412
T6324 Escherichia coli

42.222

86.538

0.373
T6363 uncultured bacterium

42.222

86.538

0.373
T10208 Escherichia coli C

41.667

96

0.392
T6369 Escherichia coli K-12

42.553

95.918

0.392
T6370 Escherichia coli

37.778

90

0.333
T10124 Erwinia amylovora ATCC 49946

55.556

84.375

0.294