NZ_LM9954463210378..3220325

MGE detailed information

MGE type: Genomic_island        MGE length: 9948 bp
Accession: NZ_LM995446        Location: 3210378..3220325         Organism: Escherichia coli strain K-12 substr. RV308       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
ECRV308_RS15890 () 3206210..3207541 - 1332 WP_000107723.1 threonine/serine transporter TdcC -
ECRV308_RS15895 () 3207563..3208552 - 990 WP_000548347.1 bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB -
ECRV308_RS15900 () 3208651..3209589 - 939 WP_000104211.1 transcriptional regulator TdcA -
ECRV308_RS25775 () 3209904..3210122 + 219 WP_001301311.1 transcriptional activator TdcR -
ECRV308_RS15910 () 3210378..3210917 + 540 WP_000675733.1 hypothetical protein -
ECRV308_RS15915 () 3210939..3212126 + 1188 WP_000484600.1 YhaC family protein -
ECRV308_RS15920 () 3213149..3214294 - 1146 WP_001300387.1 glycerate 2-kinase -
ECRV308_RS15925 () 3214391..3215281 - 891 WP_001303675.1 2-hydroxy-3-oxopropionate reductase -
ECRV308_RS15930 () 3215311..3216081 - 771 WP_001058209.1 2-dehydro-3-deoxyglucarate aldolase -
ECRV308_RS15935 () 3216097..3217431 - 1335 WP_000599636.1 galactarate/glucarate/glycerate transporter GarP -
ECRV308_RS15940 () 3217806..3219377 + 1572 WP_001273753.1 galactarate dehydratase -
ECRV308_RS15945 () 3219526..3219861 + 336 WP_001307405.1 type II toxin-antitoxin system antitoxin PrlF Antitoxin Detail
ECRV308_RS15950 () 3219861..3220325 + 465 WP_000347273.1 type II toxin-antitoxin system ribonuclease toxin YhaV Toxin Detail
ECRV308_RS15955 () 3220380..3221189 - 810 WP_000072187.1 aga operon transcriptional regulator AgaR -
ECRV308_RS15960 () 3221438..3222718 + 1281 WP_000681920.1 tagatose-bisphosphate aldolase subunit KbaZ -
ECRV308_RS15965 () 3222741..3223214 + 474 WP_001336162.1 PTS N-acetylgalactosamine transporter subunit IIB -
ECRV308_RS15970 () 3223225..3223596 + 372 Protein_3042 PTS sugar transporter subunit IIC -
ECRV308_RS15975 () 3223592..3224149 + 558 Protein_3043 amidohydrolase family protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Escherichia coli str. K-12 substr. MC4100 Genomic island TA20080 HG738867 3504819..3516493 0.004
Escherichia coli str. K-12 substr. MG1655 Genomic island TA1047 NC_000913 3267854..3277801 0
Escherichia coli str. K-12 substr. W3110 Genomic island TA21455 NC_007779 3265982..3277656 0.004
Escherichia coli HS Genomic island TA22436 NC_009800 3314965..3326421 0.008
Escherichia coli str. K-12 substr. DH10B Genomic island TA22703 NC_010473 3363621..3373568 0
Escherichia coli BW2952 Genomic island TA23871 NC_012759 3153024..3162971 0
Escherichia coli DH1 Genomic island TA27421 NC_017638 3245760..3255707 0
Escherichia coli str. K-12 substr. MDS42 Genomic island TA29016 NC_020518 2741187..2751134 0
Escherichia coli BW25113 Genomic island TA48700 NZ_CP009273 3261213..3271160 0
Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 Genomic island TA68442 NZ_CP017979 3158126..3169800 0.004
Escherichia coli C Genomic island TA75057 NZ_CP020543 640607..652281 0.005
Escherichia coli strain DH5alpha Genomic island TA90495 NZ_CP025520 2121277..2131224 0
Escherichia coli str. K-12 substr. MC4100 strain K-12 Genomic island TA285025 NZ_HG738867 3504819..3516493 0.004