NZ_CP107000605412..617086

MGE detailed information

MGE type: Genomic_island        MGE length: 11675 bp
Accession: NZ_CP107000        Location: 605412..617086         Organism: Escherichia coli strain SY22B2       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
OFB04_RS02930 (601588) 601588..602145 - 558 Protein_574 amidohydrolase family protein -
OFB04_RS02935 (602141) 602141..602512 - 372 Protein_575 PTS sugar transporter subunit IIC -
OFB04_RS02940 (602523) 602523..602996 - 474 WP_001336162.1 PTS N-acetylgalactosamine transporter subunit IIB -
OFB04_RS02945 (603019) 603019..604299 - 1281 WP_000681920.1 tagatose-bisphosphate aldolase subunit KbaZ -
OFB04_RS02950 (604548) 604548..605357 + 810 WP_000072187.1 aga operon transcriptional regulator AgaR -
OFB04_RS02955 (605412) 605412..605876 - 465 WP_000347273.1 type II toxin-antitoxin system ribonuclease toxin YhaV Toxin Detail
OFB04_RS02960 (605876) 605876..606211 - 336 WP_001307405.1 type II toxin-antitoxin system antitoxin PrlF Antitoxin Detail
OFB04_RS02965 (606360) 606360..607931 - 1572 WP_001273753.1 galactarate dehydratase -
OFB04_RS02970 (608306) 608306..609640 + 1335 WP_000599636.1 galactarate/glucarate/glycerate transporter GarP -
OFB04_RS02975 (609656) 609656..610426 + 771 WP_001058209.1 2-dehydro-3-deoxyglucarate aldolase -
OFB04_RS02980 (610456) 610456..611346 + 891 WP_001303675.1 2-hydroxy-3-oxopropionate reductase -
OFB04_RS02985 (611443) 611443..612588 + 1146 WP_001300387.1 glycerate 2-kinase -
OFB04_RS02995 (613611) 613611..614798 - 1188 WP_000484600.1 YhaC family protein -
OFB04_RS03000 (614820) 614820..615359 - 540 WP_000675733.1 protein YhaB -
OFB04_RS03005 (615615) 615615..615833 - 219 WP_001301311.1 transcriptional activator TdcR -
OFB04_RS03010 (616148) 616148..617086 + 939 WP_000104211.1 transcriptional regulator TdcA -
OFB04_RS03015 (617185) 617185..618174 + 990 WP_000548347.1 bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB -
OFB04_RS03020 (618196) 618196..619527 + 1332 WP_000107723.1 threonine/serine transporter TdcC -
OFB04_RS03025 (619553) 619553..620761 + 1209 WP_001295545.1 propionate kinase -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Escherichia coli K-12 strain ER3413 Genomic island TA20042 CP009789 3247092..3263092 0.008
Escherichia coli str. K-12 substr. MC4100 Genomic island TA20080 HG738867 3504819..3516493 0
Escherichia coli str. K-12 substr. MG1655 Genomic island TA1047 NC_000913 3267854..3277801 0.004
Escherichia coli str. K-12 substr. W3110 Genomic island TA21455 NC_007779 3265982..3277656 0
Escherichia coli HS Genomic island TA22436 NC_009800 3314965..3326421 0.003
Escherichia coli str. K-12 substr. DH10B Genomic island TA22703 NC_010473 3363621..3373568 0.004
Escherichia coli BW2952 Genomic island TA23871 NC_012759 3153024..3162971 0.004
Escherichia coli DH1 Genomic island TA27421 NC_017638 3245760..3255707 0.004
Escherichia coli str. K-12 substr. MDS42 Genomic island TA29016 NC_020518 2741187..2751134 0.004
Escherichia coli BW25113 Genomic island TA48700 NZ_CP009273 3261213..3271160 0.004
Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 Genomic island TA68442 NZ_CP017979 3158126..3169800 0
Escherichia coli C Genomic island TA75057 NZ_CP020543 640607..652281 0.001
Escherichia coli strain DH5alpha Genomic island TA90495 NZ_CP025520 2121277..2131224 0.004
Escherichia coli str. K-12 substr. MC4100 strain K-12 Genomic island TA285025 NZ_HG738867 3504819..3516493 0