NZ_CP0797674043960..4055521

MGE detailed information

MGE type: Genomic_island        MGE length: 11562 bp
Accession: NZ_CP079767        Location: 4043960..4055521         Organism: Escherichia coli strain SF10       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
KX927_RS22090 (4040136) 4040136..4040693 - 558 Protein_3905 amidohydrolase family protein -
KX927_RS22095 (4040689) 4040689..4041060 - 372 Protein_3906 PTS sugar transporter subunit IIC -
KX927_RS22100 (4041071) 4041071..4041544 - 474 WP_001336162.1 PTS N-acetylgalactosamine transporter subunit IIB -
KX927_RS22105 (4041567) 4041567..4042847 - 1281 WP_000681920.1 tagatose-bisphosphate aldolase subunit KbaZ -
KX927_RS22110 (4043096) 4043096..4043905 + 810 WP_000072187.1 aga operon transcriptional regulator AgaR -
KX927_RS22115 (4043960) 4043960..4044424 - 465 WP_000347273.1 type II toxin-antitoxin system ribonuclease toxin YhaV Toxin Detail
KX927_RS22120 (4044424) 4044424..4044759 - 336 WP_001307405.1 type II toxin-antitoxin system antitoxin PrlF Antitoxin Detail
KX927_RS22125 (4044908) 4044908..4046479 - 1572 WP_001273753.1 galactarate dehydratase -
KX927_RS22130 (4046854) 4046854..4048188 + 1335 WP_000599636.1 galactarate/glucarate/glycerate transporter GarP -
KX927_RS22135 (4048204) 4048204..4048974 + 771 WP_001058209.1 2-dehydro-3-deoxyglucarate aldolase -
KX927_RS22140 (4049004) 4049004..4049894 + 891 WP_001303675.1 2-hydroxy-3-oxopropionate reductase -
KX927_RS22145 (4049991) 4049991..4051136 + 1146 WP_001300387.1 glycerate 2-kinase -
KX927_RS22155 (4052046) 4052046..4053233 - 1188 WP_259553586.1 YhaC family protein -
KX927_RS22160 (4053255) 4053255..4053794 - 540 WP_000675733.1 protein YhaB -
KX927_RS22165 (4054050) 4054050..4054268 - 219 WP_001301311.1 transcriptional activator TdcR -
KX927_RS22170 (4054583) 4054583..4055521 + 939 WP_259553588.1 transcriptional regulator TdcA -
KX927_RS22175 (4055620) 4055620..4056609 + 990 WP_000548347.1 bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB -
KX927_RS22180 (4056631) 4056631..4057962 + 1332 WP_000107723.1 threonine/serine transporter TdcC -
KX927_RS22185 (4057988) 4057988..4059196 + 1209 WP_001295545.1 propionate kinase -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Escherichia coli K-12 strain ER3413 Genomic island TA20042 CP009789 3247092..3263092 0.008
Escherichia coli str. K-12 substr. MC4100 Genomic island TA20080 HG738867 3504819..3516493 0.001
Escherichia coli str. K-12 substr. MG1655 Genomic island TA1047 NC_000913 3267854..3277801 0.005
Escherichia coli str. K-12 substr. W3110 Genomic island TA21455 NC_007779 3265982..3277656 0.001
Escherichia coli HS Genomic island TA22436 NC_009800 3314965..3326421 0.004
Escherichia coli str. K-12 substr. DH10B Genomic island TA22703 NC_010473 3363621..3373568 0.005
Escherichia coli BW2952 Genomic island TA23871 NC_012759 3153024..3162971 0.005
Escherichia coli DH1 Genomic island TA27421 NC_017638 3245760..3255707 0.005
Escherichia coli str. K-12 substr. MDS42 Genomic island TA29016 NC_020518 2741187..2751134 0.005
Escherichia coli BW25113 Genomic island TA48700 NZ_CP009273 3261213..3271160 0.005
Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 Genomic island TA68442 NZ_CP017979 3158126..3169800 0.001
Escherichia coli C Genomic island TA75057 NZ_CP020543 640607..652281 0.001
Escherichia coli strain DH5alpha Genomic island TA90495 NZ_CP025520 2121277..2131224 0.005
Escherichia coli str. K-12 substr. MC4100 strain K-12 Genomic island TA285025 NZ_HG738867 3504819..3516493 0.001