MGE detailed information
MGE type: Integron MGE length: 48900 bp
Accession: NZ_CP053805 Location: 549333..598232 Organism: Vibrio cholerae strain SL6Y Replicon: chromosome
Accession: NZ_CP053805 Location: 549333..598232 Organism: Vibrio cholerae strain SL6Y Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HPY06_RS15910 () | 545258..546820 | - | 1563 | WP_162813145.1 | methyl-accepting chemotaxis protein | - |
| HPY06_RS15915 () | 547054..547668 | - | 615 | WP_000675194.1 | OmpA family protein | - |
| HPY06_RS15920 () | 547890..548363 | + | 474 | WP_000034756.1 | FKBP-type peptidyl-prolyl cis-trans isomerase | - |
| HPY06_RS15925 () | 548444..548878 | - | 435 | WP_175231880.1 | IS200/IS605 family transposase | - |
| HPY06_RS15930 () | 548865..548992 | - | 128 | Protein_551 | DUF645 family protein | - |
| HPY06_RS15935 () | 549333..549809 | - | 477 | WP_001047188.1 | GNAT family N-acetyltransferase | - |
| HPY06_RS15940 () | 550006..550188 | - | 183 | WP_175231582.1 | DUF645 family protein | - |
| HPY06_RS15945 () | 550461..550862 | - | 402 | WP_000351248.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| HPY06_RS15950 () | 550862..551032 | - | 171 | WP_001080654.1 | hypothetical protein | Antitoxin Detail |
| HPY06_RS15955 () | 551272..551310 | - | 39 | WP_108244118.1 | hypothetical protein | - |
| HPY06_RS15960 () | 551326..551454 | - | 129 | WP_001886422.1 | DUF645 family protein | - |
| HPY06_RS15965 () | 551775..552011 | - | 237 | WP_046126177.1 | hypothetical protein | - |
| HPY06_RS15970 () | 552014..552397 | - | 384 | Protein_559 | PhzF family phenazine biosynthesis protein | - |
| HPY06_RS15975 () | 552894..553217 | - | 324 | WP_080476600.1 | DUF3709 domain-containing protein | - |
| HPY06_RS15980 () | 553413..553700 | - | 288 | WP_000869999.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HPY06_RS15985 () | 553697..553978 | - | 282 | WP_000086649.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| HPY06_RS15990 () | 554177..554917 | - | 741 | WP_042991272.1 | PhzF family phenazine biosynthesis protein | - |
| HPY06_RS15995 () | 555083..555538 | - | 456 | WP_001245329.1 | GNAT family N-acetyltransferase | - |
| HPY06_RS16000 () | 555658..555975 | - | 318 | WP_001232701.1 | HigA family addiction module antidote protein | Antitoxin Detail |
| HPY06_RS16005 () | 555986..556273 | - | 288 | WP_001162670.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HPY06_RS16010 () | 556494..557072 | - | 579 | WP_175231584.1 | DJ-1/PfpI family protein | - |
| HPY06_RS16015 () | 557268..557450 | - | 183 | WP_033933234.1 | DUF645 family protein | - |
| HPY06_RS16020 () | 557745..558200 | - | 456 | WP_055033988.1 | hypothetical protein | - |
| HPY06_RS16025 () | 558417..558659 | + | 243 | WP_002044787.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| HPY06_RS16030 () | 558656..558955 | + | 300 | WP_000802131.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HPY06_RS16035 () | 559189..559425 | + | 237 | WP_071179254.1 | RNA-binding protein | - |
| HPY06_RS16040 () | 559625..559861 | - | 237 | WP_175231586.1 | hypothetical protein | - |
| HPY06_RS16045 () | 560200..560442 | + | 243 | WP_001961623.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| HPY06_RS16050 () | 560461..560776 | + | 316 | Protein_575 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| HPY06_RS16055 () | 560934..561197 | - | 264 | WP_000098716.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| HPY06_RS16060 () | 561190..561444 | - | 255 | WP_001223794.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | Antitoxin Detail |
| HPY06_RS16065 () | 561670..562065 | - | 396 | WP_175231588.1 | DUF4144 domain-containing protein | - |
| HPY06_RS16070 () | 562135..562560 | - | 426 | WP_069217095.1 | hypothetical protein | - |
| HPY06_RS16075 () | 562850..563134 | + | 285 | WP_000381183.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| HPY06_RS16080 () | 563131..563409 | + | 279 | WP_000578475.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| HPY06_RS16085 () | 563556..564071 | - | 516 | WP_001894921.1 | lipocalin family protein | - |
| HPY06_RS16090 () | 564218..564613 | - | 396 | WP_175231590.1 | DUF3465 domain-containing protein | - |
| HPY06_RS16095 () | 564930..565160 | - | 231 | WP_175231375.1 | DUF1289 domain-containing protein | - |
| HPY06_RS16100 () | 565340..565588 | + | 249 | WP_000213183.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| HPY06_RS16105 () | 565578..565868 | + | 291 | WP_000221352.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HPY06_RS16110 () | 565995..566291 | - | 297 | Protein_587 | DUF645 family protein | - |
| HPY06_RS16115 () | 566605..566847 | + | 243 | WP_001107719.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| HPY06_RS16120 () | 566844..567143 | + | 300 | WP_175231591.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HPY06_RS16125 () | 567261..567743 | - | 483 | WP_174500467.1 | GNAT family N-acetyltransferase | - |
| HPY06_RS16130 () | 567974..568246 | + | 273 | WP_001915058.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| HPY06_RS16135 () | 568243..568740 | + | 498 | WP_000982260.1 | GNAT family N-acetyltransferase | Toxin Detail |
| HPY06_RS16140 () | 568901..569224 | - | 324 | WP_017047369.1 | ion tolerance protein CutA | - |
| HPY06_RS16145 () | 569382..569666 | - | 285 | WP_043993102.1 | antibiotic biosynthesis monooxygenase | - |
| HPY06_RS16150 () | 569837..570223 | - | 387 | WP_175231593.1 | NUDIX hydrolase | - |
| HPY06_RS16155 () | 570487..570723 | + | 237 | WP_000772125.1 | RNA-binding protein | - |
| HPY06_RS16160 () | 570910..571299 | - | 390 | WP_000491261.1 | VOC family protein | - |
| HPY06_RS16165 () | 571657..571866 | - | 210 | WP_113629352.1 | DUF645 family protein | - |
| HPY06_RS16170 () | 572130..572726 | - | 597 | WP_175231595.1 | class I SAM-dependent methyltransferase | - |
| HPY06_RS16175 () | 572874..573191 | - | 318 | WP_001232701.1 | HigA family addiction module antidote protein | Antitoxin Detail |
| HPY06_RS16180 () | 573202..573489 | - | 288 | WP_001162670.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HPY06_RS16185 () | 573530..573652 | - | 123 | WP_175231597.1 | acetyltransferase | Antitoxin Detail |
| HPY06_RS16190 () | 573725..574129 | - | 405 | WP_175231599.1 | hypothetical protein | - |
| HPY06_RS16195 () | 574415..574693 | + | 279 | WP_001258569.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| HPY06_RS16200 () | 574686..574955 | + | 270 | WP_175231601.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| HPY06_RS16205 () | 574983..575093 | - | 111 | WP_080478885.1 | DUF3265 domain-containing protein | - |
| HPY06_RS16210 () | 575090..576628 | - | 1539 | WP_069648548.1 | RNA-directed DNA polymerase | - |
| HPY06_RS16215 () | 576768..577268 | - | 501 | WP_071180357.1 | hypothetical protein | - |
| HPY06_RS16220 () | 577425..577748 | - | 324 | WP_017047369.1 | ion tolerance protein CutA | - |
| HPY06_RS16225 () | 577924..578265 | - | 342 | WP_055030598.1 | hypothetical protein | - |
| HPY06_RS16230 () | 578299..578448 | - | 150 | WP_175231603.1 | DUF3265 domain-containing protein | - |
| HPY06_RS16235 () | 578414..578869 | - | 456 | WP_017420450.1 | hypothetical protein | - |
| HPY06_RS16240 () | 578912..579022 | - | 111 | WP_094143486.1 | DUF3265 domain-containing protein | - |
| HPY06_RS16245 () | 579019..579534 | - | 516 | WP_175231605.1 | hypothetical protein | - |
| HPY06_RS16250 () | 579720..580238 | - | 519 | WP_055028778.1 | GNAT family N-acetyltransferase | - |
| HPY06_RS16255 () | 580380..581153 | - | 774 | WP_174500479.1 | NERD domain-containing protein | - |
| HPY06_RS16260 () | 581182..581298 | - | 117 | WP_080299869.1 | DUF3265 domain-containing protein | - |
| HPY06_RS16265 () | 581299..581913 | - | 615 | WP_101411729.1 | hypothetical protein | - |
| HPY06_RS16270 () | 582060..582335 | - | 276 | WP_019283461.1 | antibiotic biosynthesis monooxygenase | - |
| HPY06_RS16275 () | 582485..583033 | - | 549 | WP_055045003.1 | hypothetical protein | - |
| HPY06_RS16280 () | 583033..583938 | - | 906 | WP_055045002.1 | DUF4747 family protein | - |
| HPY06_RS16285 () | 584143..584913 | - | 771 | WP_002044830.1 | alpha/beta hydrolase | - |
| HPY06_RS16290 () | 585207..585530 | - | 324 | WP_175231607.1 | DUF3709 domain-containing protein | - |
| HPY06_RS16295 () | 585807..586079 | + | 273 | WP_000246254.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| HPY06_RS16300 () | 586076..586573 | + | 498 | WP_175231609.1 | GNAT family N-acetyltransferase | Toxin Detail |
| HPY06_RS16305 () | 586721..587191 | - | 471 | WP_175231611.1 | hypothetical protein | - |
| HPY06_RS16310 () | 587389..587559 | - | 171 | WP_032480857.1 | DUF645 family protein | - |
| HPY06_RS16315 () | 587923..588105 | - | 183 | WP_095458040.1 | DUF645 family protein | - |
| HPY06_RS16320 () | 588420..588641 | - | 222 | Protein_629 | DUF645 family protein | - |
| HPY06_RS16325 () | 589617..591410 | - | 1794 | WP_175231882.1 | AAA family ATPase | - |
| HPY06_RS16330 () | 591571..592338 | - | 768 | WP_033930505.1 | hypothetical protein | - |
| HPY06_RS16335 () | 592534..592572 | - | 39 | WP_114764047.1 | hypothetical protein | - |
| HPY06_RS16340 () | 592588..592716 | - | 129 | WP_057556379.1 | DUF645 family protein | - |
| HPY06_RS16345 () | 593202..593441 | - | 240 | WP_032479075.1 | hypothetical protein | - |
| HPY06_RS16350 () | 593604..594140 | - | 537 | WP_175231884.1 | nucleotidyltransferase family protein | - |
| HPY06_RS16355 () | 594335..594427 | - | 93 | Protein_636 | DUF645 family protein | - |
| HPY06_RS16360 () | 594427..594516 | - | 90 | WP_001905720.1 | DUF645 family protein | - |
| HPY06_RS16365 () | 594812..595816 | - | 1005 | WP_175231613.1 | LD-carboxypeptidase | - |
| HPY06_RS16370 () | 595975..596346 | - | 372 | WP_175231886.1 | hypothetical protein | - |
| HPY06_RS16375 () | 596705..596938 | - | 234 | WP_175231615.1 | DUF3709 domain-containing protein | - |
| HPY06_RS16380 () | 596935..597119 | - | 185 | Protein_641 | DUF3709 domain-containing protein | - |
| HPY06_RS16385 () | 597209..597712 | - | 504 | WP_142728567.1 | DinB family protein | - |
| HPY06_RS16390 () | 597879..598379 | - | 501 | Protein_643 | abortive infection family protein | - |
| HPY06_RS16395 () | 598438..599478 | - | 1041 | WP_000903432.1 | IS481-like element ISVvu4 family transposase | - |
| HPY06_RS16400 () | 599680..600669 | - | 990 | WP_033927936.1 | GTP-binding protein | - |
| HPY06_RS16405 () | 601136..602542 | + | 1407 | WP_000107452.1 | H(+)/Cl(-) exchange transporter ClcA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|