MGE detailed information
MGE type: Integron MGE length: 44306 bp
Accession: NZ_CP053801 Location: 382712..427017 Organism: Vibrio cholerae strain SO5Y Replicon: chromosome
Accession: NZ_CP053801 Location: 382712..427017 Organism: Vibrio cholerae strain SO5Y Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HPY15_RS15250 () | 378238..378336 | - | 99 | WP_142741450.1 | acetyltransferase | - |
| HPY15_RS15255 () | 378453..378701 | + | 249 | WP_000213183.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| HPY15_RS15260 () | 378691..378981 | + | 291 | WP_000221352.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HPY15_RS15265 () | 378999..379109 | - | 111 | WP_082798255.1 | DUF3265 domain-containing protein | - |
| HPY15_RS15270 () | 379106..379423 | - | 318 | WP_001232701.1 | HigA family addiction module antidote protein | Antitoxin Detail |
| HPY15_RS15275 () | 379434..379721 | - | 288 | WP_001162670.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HPY15_RS15280 () | 380073..380281 | - | 209 | Protein_374 | DUF3709 domain-containing protein | - |
| HPY15_RS15285 () | 380578..381210 | - | 633 | WP_175235993.1 | hypothetical protein | - |
| HPY15_RS15290 () | 381464..381745 | - | 282 | WP_080341684.1 | DUF1289 domain-containing protein | - |
| HPY15_RS15295 () | 381694..381807 | - | 114 | WP_080341690.1 | acetyltransferase | - |
| HPY15_RS15300 () | 381863..382243 | - | 381 | WP_046126206.1 | glyoxalase | - |
| HPY15_RS15305 () | 382712..383632 | - | 921 | WP_001896359.1 | IS5 family transposase ISVch8 | Transposase |
| HPY15_RS15310 () | 383936..384940 | + | 1005 | WP_000964932.1 | LD-carboxypeptidase | - |
| HPY15_RS15315 () | 385095..385460 | + | 366 | WP_046121679.1 | DUF3465 domain-containing protein | - |
| HPY15_RS15320 () | 385676..386008 | + | 333 | WP_000843587.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HPY15_RS15325 () | 385995..386309 | + | 315 | WP_000071008.1 | DNA-binding transcriptional regulator | Antitoxin Detail |
| HPY15_RS15330 () | 386603..386730 | + | 128 | Protein_384 | DUF645 family protein | - |
| HPY15_RS15335 () | 386746..386784 | + | 39 | WP_108244118.1 | hypothetical protein | - |
| HPY15_RS15340 () | 387287..387424 | + | 138 | WP_000757220.1 | YHYH domain-containing protein | - |
| HPY15_RS15345 () | 387616..387978 | + | 363 | WP_162484548.1 | DUF4144 domain-containing protein | - |
| HPY15_RS15350 () | 388141..388488 | + | 348 | WP_000933405.1 | hypothetical protein | - |
| HPY15_RS15355 () | 388620..389108 | + | 489 | WP_175235995.1 | GNAT family N-acetyltransferase | - |
| HPY15_RS15360 () | 389131..390090 | - | 960 | WP_001898459.1 | IS30 family transposase ISVvu6 | Transposase |
| HPY15_RS15365 () | 390754..391020 | + | 267 | WP_000589156.1 | BrnT family toxin | Toxin Detail |
| HPY15_RS15370 () | 391007..391252 | + | 246 | WP_000643598.1 | hypothetical protein | Antitoxin Detail |
| HPY15_RS15375 () | 391469..392077 | + | 609 | WP_046126193.1 | hypothetical protein | - |
| HPY15_RS15380 () | 392685..393080 | + | 396 | WP_032473749.1 | DUF3465 domain-containing protein | - |
| HPY15_RS15385 () | 393236..393757 | + | 522 | WP_080341682.1 | hypothetical protein | - |
| HPY15_RS15390 () | 394506..394919 | + | 414 | WP_046126191.1 | VOC family protein | - |
| HPY15_RS15395 () | 395105..395341 | - | 237 | WP_046126190.1 | RNA-binding protein | - |
| HPY15_RS15400 () | 395514..395990 | + | 477 | WP_080341680.1 | hypothetical protein | - |
| HPY15_RS15405 () | 396181..396438 | + | 258 | WP_000861987.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| HPY15_RS15410 () | 396426..396728 | + | 303 | WP_046126188.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HPY15_RS15415 () | 396904..397818 | + | 915 | WP_046126187.1 | hypothetical protein | - |
| HPY15_RS15420 () | 397941..398240 | - | 300 | WP_000802136.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HPY15_RS15425 () | 398237..398479 | - | 243 | WP_001107719.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| HPY15_RS15430 () | 398847..399167 | + | 321 | Protein_404 | DUF645 family protein | - |
| HPY15_RS15435 () | 399234..399572 | + | 339 | WP_046127316.1 | hypothetical protein | - |
| HPY15_RS15440 () | 399738..400124 | + | 387 | WP_001015864.1 | NUDIX hydrolase | - |
| HPY15_RS15445 () | 400349..400633 | + | 285 | WP_046126186.1 | HEAT repeat domain-containing protein | - |
| HPY15_RS15450 () | 400769..401086 | - | 318 | WP_046126185.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HPY15_RS15455 () | 401105..401347 | - | 243 | WP_000557291.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| HPY15_RS15460 () | 401739..401918 | + | 180 | WP_162484547.1 | DUF645 family protein | - |
| HPY15_RS15465 () | 402278..402454 | + | 177 | Protein_411 | DUF645 family protein | - |
| HPY15_RS15470 () | 402670..403047 | + | 378 | WP_046126182.1 | hypothetical protein | - |
| HPY15_RS15475 () | 403192..403674 | + | 483 | WP_046126181.1 | GNAT family N-acetyltransferase | - |
| HPY15_RS15480 () | 403857..404180 | + | 324 | WP_080341697.1 | DUF3709 domain-containing protein | - |
| HPY15_RS15485 () | 404478..405218 | + | 741 | Protein_415 | PhzF family phenazine biosynthesis protein | - |
| HPY15_RS15490 () | 405377..405790 | + | 414 | WP_000451552.1 | GNAT family N-acetyltransferase | - |
| HPY15_RS15495 () | 405965..406360 | + | 396 | WP_046126178.1 | DUF3465 domain-containing protein | - |
| HPY15_RS15500 () | 406615..406851 | + | 237 | WP_046126177.1 | hypothetical protein | - |
| HPY15_RS15505 () | 407180..407350 | + | 171 | WP_032473200.1 | DUF645 family protein | - |
| HPY15_RS15510 () | 407578..408081 | + | 504 | WP_046126176.1 | DinB family protein | - |
| HPY15_RS15515 () | 408138..408224 | + | 87 | WP_167335580.1 | acetyltransferase | - |
| HPY15_RS15520 () | 408274..408468 | + | 195 | WP_046126175.1 | hypothetical protein | - |
| HPY15_RS15525 () | 408477..409397 | - | 921 | WP_001896359.1 | IS5 family transposase ISVch8 | Transposase |
| HPY15_RS15530 () | 409477..409890 | + | 414 | Protein_424 | hypothetical protein | - |
| HPY15_RS15535 () | 410081..410251 | + | 171 | WP_046127315.1 | hypothetical protein | Antitoxin Detail |
| HPY15_RS15540 () | 410251..410652 | + | 402 | WP_046126173.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| HPY15_RS15545 () | 410792..411127 | + | 336 | WP_019829648.1 | hypothetical protein | - |
| HPY15_RS15550 () | 411321..411465 | + | 145 | Protein_428 | DUF3709 domain-containing protein | - |
| HPY15_RS15555 () | 412242..412655 | + | 414 | WP_046126172.1 | VOC family protein | - |
| HPY15_RS15560 () | 412889..413911 | + | 1023 | WP_046126171.1 | hypothetical protein | - |
| HPY15_RS15565 () | 413952..414434 | + | 483 | WP_001900268.1 | hypothetical protein | - |
| HPY15_RS15570 () | 414644..414898 | + | 255 | WP_001223794.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | Antitoxin Detail |
| HPY15_RS15575 () | 414891..415154 | + | 264 | WP_000098716.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| HPY15_RS15580 () | 415234..415341 | + | 108 | WP_080341671.1 | acetyltransferase | Antitoxin Detail |
| HPY15_RS15585 () | 415769..416707 | + | 939 | WP_055032204.1 | 5'-nucleotidase | - |
| HPY15_RS15590 () | 417000..417182 | + | 183 | WP_009355233.1 | DUF645 family protein | - |
| HPY15_RS15595 () | 417385..417882 | + | 498 | WP_046126169.1 | GNAT family N-acetyltransferase | - |
| HPY15_RS15600 () | 417939..418058 | + | 120 | WP_114780049.1 | acetyltransferase | - |
| HPY15_RS15605 () | 417999..418316 | - | 318 | WP_000077272.1 | CcdB family protein | - |
| HPY15_RS15610 () | 418316..418561 | - | 246 | WP_001260801.1 | type II toxin-antitoxin system CcdA family antitoxin | - |
| HPY15_RS15615 () | 418929..419486 | + | 558 | Protein_441 | nucleotidyltransferase domain-containing protein | - |
| HPY15_RS15620 () | 419619..420281 | + | 663 | WP_076008610.1 | Streptogramin A acetyltransferase | VF |
| HPY15_RS15625 () | 420304..421263 | - | 960 | WP_001898459.1 | IS30 family transposase ISVvu6 | Transposase |
| HPY15_RS15630 () | 421418..422272 | + | 855 | WP_142741583.1 | aminoglycoside phosphotransferase family protein | - |
| HPY15_RS15635 () | 422412..422690 | - | 279 | WP_000578471.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| HPY15_RS15640 () | 422687..422971 | - | 285 | WP_000381183.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| HPY15_RS15645 () | 423300..424232 | + | 933 | WP_046126168.1 | hypothetical protein | - |
| HPY15_RS15650 () | 424216..424644 | + | 429 | WP_000074666.1 | hypothetical protein | - |
| HPY15_RS15655 () | 424872..425153 | + | 282 | WP_000086650.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| HPY15_RS15660 () | 425150..425437 | + | 288 | WP_017049660.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HPY15_RS15665 () | 425605..426609 | + | 1005 | WP_046126167.1 | LD-carboxypeptidase | - |
| HPY15_RS15670 () | 427026..427946 | - | 921 | WP_001896359.1 | IS5-like element ISVch8 family transposase | - |
| HPY15_RS15675 () | 428812..429093 | - | 282 | WP_080284439.1 | DUF1289 domain-containing protein | - |
| HPY15_RS15680 () | 429042..429155 | - | 114 | WP_080341667.1 | acetyltransferase | - |
| HPY15_RS15685 () | 429212..429769 | - | 558 | WP_046126164.1 | hypothetical protein | - |
| HPY15_RS15690 () | 429870..430790 | + | 921 | WP_001896359.1 | IS5-like element ISVch8 family transposase | - |
| HPY15_RS15695 () | 430908..431252 | + | 345 | WP_046126163.1 | superinfection immunity protein | - |
| HPY15_RS15700 () | 431453..431623 | + | 171 | WP_046126162.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|