MGE detailed information
MGE type: Integron MGE length: 78340 bp
Accession: NZ_CP053795 Location: 307330..385669 Organism: Vibrio cholerae strain W10G Replicon: chromosome
Accession: NZ_CP053795 Location: 307330..385669 Organism: Vibrio cholerae strain W10G Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HPY12_RS15140 () | 302649..303779 | + | 1131 | WP_057568213.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| HPY12_RS15145 () | 304072..306000 | + | 1929 | WP_001121787.1 | threonine--tRNA ligase | - |
| HPY12_RS15150 () | 306004..306555 | + | 552 | WP_001894072.1 | translation initiation factor IF-3 | - |
| HPY12_RS15155 () | 306659..306853 | + | 195 | WP_001885060.1 | 50S ribosomal protein L35 | - |
| HPY12_RS15160 () | 306895..307248 | + | 354 | WP_001138366.1 | 50S ribosomal protein L20 | - |
| HPY12_RS15165 () | 307330..308292 | - | 963 | WP_000841995.1 | IS91 family transposase ISAzo26 | Transposase |
| HPY12_RS15170 () | 309109..309687 | + | 579 | WP_001020574.1 | DJ-1/PfpI family protein | - |
| HPY12_RS15175 () | 309886..310128 | + | 243 | WP_053034790.1 | hypothetical protein | - |
| HPY12_RS15180 () | 310379..311339 | - | 961 | Protein_255 | IS30 family transposase ISVvu6 | Transposase |
| HPY12_RS15185 () | 311238..311963 | + | 726 | WP_175234247.1 | hypothetical protein | - |
| HPY12_RS15190 () | 312098..312580 | + | 483 | WP_057569104.1 | GNAT family N-acetyltransferase | - |
| HPY12_RS15195 () | 312729..313238 | + | 510 | WP_057569036.1 | hypothetical protein | - |
| HPY12_RS15200 () | 313400..314200 | + | 801 | WP_002045689.1 | PhzF family phenazine biosynthesis protein | - |
| HPY12_RS15205 () | 314465..316300 | + | 1836 | WP_175234252.1 | AAA family ATPase | - |
| HPY12_RS15210 () | 316353..316457 | + | 105 | WP_175234253.1 | hypothetical protein | - |
| HPY12_RS15215 () | 316479..317135 | + | 657 | WP_175234255.1 | DUF4145 domain-containing protein | - |
| HPY12_RS15220 () | 317111..317242 | + | 132 | WP_148547062.1 | DUF3265 domain-containing protein | - |
| HPY12_RS15225 () | 317293..317634 | + | 342 | WP_057568323.1 | hypothetical protein | - |
| HPY12_RS15230 () | 317663..317947 | + | 285 | WP_057568325.1 | hypothetical protein | - |
| HPY12_RS15235 () | 318256..318435 | + | 180 | WP_057568327.1 | DUF645 family protein | - |
| HPY12_RS15240 () | 318715..320268 | + | 1554 | WP_057552703.1 | TIGR04141 family sporadically distributed protein | - |
| HPY12_RS15245 () | 320261..320383 | + | 123 | WP_080388942.1 | DUF3265 domain-containing protein | - |
| HPY12_RS15250 () | 320478..320867 | + | 390 | WP_005528039.1 | VOC family protein | - |
| HPY12_RS15255 () | 321518..321982 | + | 465 | WP_057568348.1 | GNAT family N-acetyltransferase | - |
| HPY12_RS15260 () | 322102..322497 | + | 396 | WP_000046952.1 | hypothetical protein | - |
| HPY12_RS15265 () | 322710..323099 | + | 390 | WP_055065342.1 | VOC family protein | - |
| HPY12_RS15270 () | 323261..324163 | + | 903 | WP_057568338.1 | hypothetical protein | - |
| HPY12_RS15275 () | 324275..324775 | + | 501 | WP_000686372.1 | NAD(P)H-dependent oxidoreductase | - |
| HPY12_RS15280 () | 324866..325228 | + | 363 | WP_162096957.1 | DUF4144 domain-containing protein | - |
| HPY12_RS15285 () | 325389..325859 | + | 471 | WP_114726119.1 | GNAT family N-acetyltransferase | - |
| HPY12_RS15290 () | 326080..326367 | + | 288 | WP_001162670.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HPY12_RS15295 () | 326378..326695 | + | 318 | WP_001232701.1 | HigA family addiction module antidote protein | Antitoxin Detail |
| HPY12_RS15300 () | 326857..327096 | + | 240 | WP_032479075.1 | hypothetical protein | - |
| HPY12_RS15305 () | 327379..327540 | + | 162 | Protein_280 | DUF3709 domain-containing protein | - |
| HPY12_RS15310 () | 327558..327782 | + | 225 | WP_080389379.1 | DUF3709 domain-containing protein | - |
| HPY12_RS15315 () | 328075..328629 | + | 555 | WP_057568340.1 | hypothetical protein | - |
| HPY12_RS15320 () | 328626..328736 | + | 111 | WP_080389381.1 | DUF3265 domain-containing protein | - |
| HPY12_RS15325 () | 328774..329097 | + | 324 | WP_175234256.1 | hypothetical protein | - |
| HPY12_RS15330 () | 329408..329587 | + | 180 | WP_057569791.1 | DUF645 family protein | - |
| HPY12_RS15335 () | 329737..330426 | + | 690 | WP_057568343.1 | FMN-binding negative transcriptional regulator | - |
| HPY12_RS15340 () | 330720..330860 | + | 141 | WP_175234257.1 | DUF645 family protein | - |
| HPY12_RS15345 () | 331109..331648 | + | 540 | WP_000884561.1 | hydrolase | - |
| HPY12_RS15350 () | 331804..332175 | + | 372 | WP_001164075.1 | nucleotide pyrophosphohydrolase | - |
| HPY12_RS15355 () | 332322..332681 | + | 360 | WP_057568344.1 | HNH endonuclease | - |
| HPY12_RS15360 () | 332858..333244 | + | 387 | WP_001015868.1 | NUDIX hydrolase | - |
| HPY12_RS15365 () | 333374..333862 | + | 489 | WP_000110032.1 | GNAT family N-acetyltransferase | - |
| HPY12_RS15370 () | 333919..334000 | + | 82 | Protein_293 | GNAT family N-acetyltransferase | - |
| HPY12_RS15375 () | 334405..334920 | + | 516 | WP_071187514.1 | lipocalin family protein | - |
| HPY12_RS15380 () | 335065..335580 | + | 516 | WP_175234258.1 | lipocalin family protein | - |
| HPY12_RS15385 () | 335762..335998 | - | 237 | WP_000772128.1 | RNA-binding protein | - |
| HPY12_RS15390 () | 336264..336800 | + | 537 | WP_057569792.1 | GNAT family N-acetyltransferase | - |
| HPY12_RS15395 () | 336949..337296 | + | 348 | WP_000933409.1 | hypothetical protein | - |
| HPY12_RS15400 () | 337594..337773 | + | 180 | WP_148524399.1 | DUF645 family protein | - |
| HPY12_RS15405 () | 337967..338444 | + | 478 | Protein_300 | nucleotidyltransferase family protein | - |
| HPY12_RS15410 () | 338603..339403 | + | 801 | WP_080389385.1 | PhzF family phenazine biosynthesis protein | - |
| HPY12_RS15415 () | 339603..339845 | + | 243 | WP_053034790.1 | hypothetical protein | - |
| HPY12_RS15420 () | 339926..340033 | + | 108 | Protein_303 | GNAT family N-acetyltransferase | - |
| HPY12_RS15425 () | 340633..341085 | + | 453 | WP_057569102.1 | GNAT family N-acetyltransferase | - |
| HPY12_RS15430 () | 341257..341937 | + | 681 | WP_047726408.1 | FRG domain-containing protein | - |
| HPY12_RS15435 () | 341927..342049 | + | 123 | WP_080389340.1 | DUF3265 domain-containing protein | - |
| HPY12_RS15440 () | 342096..343001 | + | 906 | WP_057569100.1 | hypothetical protein | - |
| HPY12_RS15445 () | 343228..344145 | + | 918 | WP_057569098.1 | alpha/beta hydrolase | - |
| HPY12_RS15450 () | 344288..344782 | + | 495 | WP_057569096.1 | GNAT family N-acetyltransferase | - |
| HPY12_RS15455 () | 344956..345192 | - | 237 | WP_000772128.1 | RNA-binding protein | - |
| HPY12_RS15460 () | 345606..345785 | + | 180 | WP_148524399.1 | DUF645 family protein | - |
| HPY12_RS15465 () | 345986..346549 | + | 564 | WP_032469482.1 | hypothetical protein | - |
| HPY12_RS15470 () | 346783..347742 | - | 960 | WP_001898459.1 | IS30 family transposase ISVvu6 | Transposase |
| HPY12_RS15475 () | 347641..348366 | + | 726 | WP_175234247.1 | hypothetical protein | - |
| HPY12_RS15480 () | 348503..348937 | + | 435 | WP_000256034.1 | GNAT family N-acetyltransferase | - |
| HPY12_RS15485 () | 349102..349638 | + | 537 | WP_057571969.1 | GNAT family N-acetyltransferase | - |
| HPY12_RS15490 () | 349936..350115 | + | 180 | WP_057569084.1 | DUF645 family protein | - |
| HPY12_RS15495 () | 350291..350590 | - | 300 | WP_001247271.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HPY12_RS15500 () | 350587..350829 | - | 243 | WP_011080384.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| HPY12_RS15505 () | 351528..352298 | + | 771 | WP_057569086.1 | alpha/beta hydrolase | - |
| HPY12_RS15510 () | 352590..352772 | + | 183 | WP_019281482.1 | DUF645 family protein | - |
| HPY12_RS15515 () | 352887..352970 | + | 84 | WP_080099571.1 | acetyltransferase | - |
| HPY12_RS15520 () | 352983..353342 | + | 360 | WP_175234259.1 | VOC family protein | - |
| HPY12_RS15525 () | 353639..353818 | + | 180 | WP_080389342.1 | DUF645 family protein | - |
| HPY12_RS15530 () | 354019..354507 | + | 489 | WP_057569088.1 | hypothetical protein | - |
| HPY12_RS15535 () | 355097..355612 | + | 516 | Protein_326 | ClbS/DfsB family four-helix bundle protein | - |
| HPY12_RS15540 () | 355920..356102 | + | 183 | WP_043992545.1 | DUF645 family protein | - |
| HPY12_RS15545 () | 356391..356816 | + | 426 | WP_001898239.1 | hypothetical protein | - |
| HPY12_RS15550 () | 357052..357339 | + | 288 | WP_001162670.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HPY12_RS15555 () | 357350..357667 | + | 318 | WP_001898235.1 | HigA family addiction module antidote protein | Antitoxin Detail |
| HPY12_RS15560 () | 357787..358302 | + | 516 | WP_000090010.1 | hypothetical protein | - |
| HPY12_RS15565 () | 358564..358800 | + | 237 | Protein_332 | DUF3709 domain-containing protein | - |
| HPY12_RS15570 () | 359088..359417 | + | 330 | WP_043990318.1 | DHCW motif cupin fold protein | - |
| HPY12_RS15575 () | 359728..359853 | + | 126 | WP_080285473.1 | DUF645 family protein | - |
| HPY12_RS15580 () | 359869..359907 | + | 39 | WP_148506239.1 | hypothetical protein | - |
| HPY12_RS15585 () | 360092..360382 | - | 291 | WP_000221352.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HPY12_RS15590 () | 360372..360620 | - | 249 | WP_000213183.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| HPY12_RS15595 () | 360862..361185 | + | 324 | WP_080375416.1 | DUF3709 domain-containing protein | - |
| HPY12_RS15600 () | 361459..362463 | + | 1005 | WP_000964934.1 | LD-carboxypeptidase | - |
| HPY12_RS15605 () | 362643..362813 | + | 171 | WP_001080654.1 | hypothetical protein | Antitoxin Detail |
| HPY12_RS15610 () | 362813..363214 | + | 402 | WP_000351248.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| HPY12_RS15615 () | 363184..363327 | + | 144 | WP_071908341.1 | DUF3265 domain-containing protein | - |
| HPY12_RS15620 () | 363413..363664 | + | 252 | WP_088124792.1 | TIGR03643 family protein | - |
| HPY12_RS15625 () | 363828..364673 | + | 846 | WP_057569090.1 | hypothetical protein | - |
| HPY12_RS15630 () | 364839..365477 | + | 639 | WP_057569094.1 | HD domain-containing protein | - |
| HPY12_RS15635 () | 365632..366171 | + | 540 | WP_057569092.1 | phosphoglycerate mutase family protein | - |
| HPY12_RS15640 () | 366261..366842 | + | 582 | WP_043990376.1 | nucleotidyltransferase family protein | - |
| HPY12_RS15645 () | 366980..367579 | + | 600 | WP_043990194.1 | glutathione S-transferase N-terminal domain-containing protein | - |
| HPY12_RS15650 () | 367764..368177 | + | 414 | WP_000049417.1 | VOC family protein | - |
| HPY12_RS15655 () | 368390..368641 | + | 252 | WP_001250179.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| HPY12_RS15660 () | 368631..368918 | + | 288 | WP_000221354.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HPY12_RS15665 () | 369046..369502 | + | 457 | Protein_352 | GNAT family N-acetyltransferase | - |
| HPY12_RS15670 () | 369824..369976 | + | 153 | WP_001884520.1 | DUF645 family protein | - |
| HPY12_RS15675 () | 370179..370676 | - | 498 | WP_000982260.1 | GNAT family N-acetyltransferase | Toxin Detail |
| HPY12_RS15680 () | 370673..370945 | - | 273 | WP_000246253.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| HPY12_RS15685 () | 371063..372022 | - | 960 | WP_001898459.1 | IS30 family transposase ISVvu6 | Transposase |
| HPY12_RS15690 () | 372311..372568 | + | 258 | WP_000861987.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| HPY12_RS15695 () | 372556..372858 | + | 303 | WP_000229325.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HPY12_RS15700 () | 373146..373370 | + | 225 | WP_161571222.1 | DUF3709 domain-containing protein | - |
| HPY12_RS15705 () | 373811..373897 | + | 87 | WP_134820423.1 | DUF645 family protein | - |
| HPY12_RS15710 () | 373897..373989 | + | 93 | Protein_361 | DUF645 family protein | - |
| HPY12_RS15715 () | 374140..374808 | + | 669 | WP_002033340.1 | hypothetical protein | - |
| HPY12_RS15720 () | 374870..375307 | - | 438 | WP_000503164.1 | IS200-IS605 family transposase IS1004 | Transposase |
| HPY12_RS15725 () | 375421..375543 | + | 123 | WP_154591787.1 | DUF3265 domain-containing protein | - |
| HPY12_RS15730 () | 375649..375684 | + | 36 | WP_172884631.1 | hypothetical protein | - |
| HPY12_RS15735 () | 375702..375962 | + | 261 | WP_032468027.1 | DUF3709 domain-containing protein | - |
| HPY12_RS15740 () | 376210..376581 | + | 372 | WP_001164080.1 | nucleotide pyrophosphohydrolase | - |
| HPY12_RS15745 () | 376648..377073 | + | 426 | WP_001882332.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| HPY12_RS15750 () | 377070..377603 | + | 534 | WP_000118351.1 | GNAT family N-acetyltransferase | Toxin Detail |
| HPY12_RS15755 () | 378289..378498 | + | 210 | Protein_370 | GNAT family N-acetyltransferase | - |
| HPY12_RS15760 () | 378617..379054 | + | 438 | WP_000503164.1 | IS200-IS605 family transposase IS1004 | Transposase |
| HPY12_RS15765 () | 379118..379336 | + | 219 | WP_071908318.1 | GNAT family N-acetyltransferase | - |
| HPY12_RS15770 () | 379511..380383 | + | 873 | Protein_373 | DUF3800 domain-containing protein | - |
| HPY12_RS15775 () | 380533..381132 | + | 600 | WP_001891245.1 | glutathione S-transferase N-terminal domain-containing protein | - |
| HPY12_RS15780 () | 381189..381293 | + | 105 | WP_099607150.1 | acetyltransferase | Antitoxin Detail |
| HPY12_RS15785 () | 381324..381593 | + | 270 | WP_001114075.1 | DUF4160 domain-containing protein | Toxin Detail |
| HPY12_RS15790 () | 381587..382108 | + | 522 | WP_000921691.1 | DUF2442 domain-containing protein | Antitoxin Detail |
| HPY12_RS15795 () | 382407..382532 | + | 126 | WP_001905700.1 | DUF645 family protein | - |
| HPY12_RS15800 () | 382783..383178 | + | 396 | WP_001000868.1 | hypothetical protein | - |
| HPY12_RS15805 () | 383317..383595 | - | 279 | WP_001897114.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| HPY12_RS15810 () | 383592..383876 | - | 285 | WP_000381183.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| HPY12_RS15815 () | 384070..384585 | + | 516 | WP_000343786.1 | hypothetical protein | VF |
| HPY12_RS15820 () | 384769..385182 | + | 414 | WP_000049420.1 | VOC family protein | - |
| HPY12_RS15825 () | 385737..386916 | + | 1180 | Protein_384 | IS3 family transposase | - |
| HPY12_RS15830 () | 387321..390108 | + | 2788 | Protein_385 | alkaline phosphatase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|