MGE detailed information
MGE type: Genomic_island MGE length: 9795 bp
Accession: NZ_CP044293 Location: 1662444..1672238 Organism: Escherichia coli strain P276M Replicon: chromosome
Accession: NZ_CP044293 Location: 1662444..1672238 Organism: Escherichia coli strain P276M Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F6P95_RS08130 () | 1658392..1659165 | - | 774 | Protein_1588 | threonine/serine transporter TdcC | - |
| F6P95_RS08135 () | 1659859..1660626 | - | 768 | Protein_1589 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| F6P95_RS08140 () | 1660725..1661663 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| F6P95_RS08145 () | 1661992..1662188 | + | 197 | Protein_1591 | DNA-binding transcriptional activator TdcR | - |
| F6P95_RS08150 () | 1662444..1662961 | + | 518 | Protein_1592 | hypothetical protein | - |
| F6P95_RS08155 () | 1663039..1663552 | + | 514 | Protein_1593 | hypothetical protein | - |
| F6P95_RS08165 () | 1665070..1666215 | - | 1146 | WP_001300387.1 | glycerate 2-kinase | - |
| F6P95_RS08170 () | 1666312..1667202 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| F6P95_RS08175 () | 1667232..1668002 | - | 771 | WP_001058209.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| F6P95_RS08180 () | 1668018..1669352 | - | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| F6P95_RS08185 () | 1669719..1671290 | + | 1572 | WP_072778057.1 | galactarate dehydratase | - |
| F6P95_RS08190 () | 1671439..1671774 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| F6P95_RS08195 () | 1671774..1672238 | + | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| F6P95_RS08200 () | 1672293..1673102 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| F6P95_RS08205 () | 1673351..1674631 | + | 1281 | WP_000681920.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| F6P95_RS08210 () | 1674654..1675127 | + | 474 | WP_001336162.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| F6P95_RS08215 () | 1675138..1675917 | + | 780 | WP_000406208.1 | PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC | - |
| F6P95_RS08220 () | 1675907..1676785 | + | 879 | WP_001295548.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| F6P95_RS08225 () | 1676803..1677237 | + | 435 | WP_000948842.1 | PTS sugar transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20080 | HG738867 | 3504819..3516493 | 0.01 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA1047 | NC_000913 | 3267854..3277801 | 0.006 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21455 | NC_007779 | 3265982..3277656 | 0.01 | |
| Escherichia coli str. K-12 substr. DH10B | Genomic island | TA22703 | NC_010473 | 3363621..3373568 | 0.006 | |
| Escherichia coli BW2952 | Genomic island | TA23871 | NC_012759 | 3153024..3162971 | 0.006 | |
| Escherichia coli DH1 | Genomic island | TA27421 | NC_017638 | 3245760..3255707 | 0.006 | |
| Escherichia coli str. K-12 substr. MDS42 | Genomic island | TA29016 | NC_020518 | 2741187..2751134 | 0.006 | |
| Escherichia coli BW25113 | Genomic island | TA48700 | NZ_CP009273 | 3261213..3271160 | 0.006 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68442 | NZ_CP017979 | 3158126..3169800 | 0.01 | |
| Escherichia coli C | Genomic island | TA75057 | NZ_CP020543 | 640607..652281 | 0.01 | |
| Escherichia coli strain DH5alpha | Genomic island | TA90495 | NZ_CP025520 | 2121277..2131224 | 0.006 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285025 | NZ_HG738867 | 3504819..3516493 | 0.01 |