NZ_CP0423362432896..2442843

MGE detailed information

MGE type: Genomic_island        MGE length: 9948 bp
Accession: NZ_CP042336        Location: 2432896..2442843         Organism: Escherichia coli strain GZ04-0086       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
E3B71_RS13980 () 2428728..2430059 - 1332 WP_000107723.1 threonine/serine transporter TdcC -
E3B71_RS13985 () 2430081..2431070 - 990 WP_000548347.1 bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB -
E3B71_RS13990 () 2431169..2432107 - 939 WP_000104211.1 transcriptional regulator TdcA -
E3B71_RS13995 () 2432296..2432640 + 345 WP_000145840.1 transcriptional activator TdcR -
E3B71_RS14000 () 2432896..2433435 + 540 WP_000675733.1 hypothetical protein -
E3B71_RS14005 () 2433457..2434644 + 1188 WP_046464216.1 YhaC family protein -
E3B71_RS14015 () 2435667..2436812 - 1146 WP_001300387.1 glycerate 2-kinase -
E3B71_RS14020 () 2436909..2437799 - 891 WP_001303675.1 2-hydroxy-3-oxopropionate reductase -
E3B71_RS14025 () 2437829..2438599 - 771 WP_001058209.1 2-dehydro-3-deoxyglucarate aldolase -
E3B71_RS14030 () 2438615..2439949 - 1335 WP_000599636.1 galactarate/glucarate/glycerate transporter GarP -
E3B71_RS14035 () 2440324..2441895 + 1572 WP_001273752.1 galactarate dehydratase -
E3B71_RS14040 () 2442044..2442379 + 336 WP_001307405.1 type II toxin-antitoxin system antitoxin PrlF Antitoxin Detail
E3B71_RS14045 () 2442379..2442843 + 465 WP_000347275.1 type II toxin-antitoxin system ribonuclease toxin YhaV Toxin Detail
E3B71_RS14050 () 2442898..2443707 - 810 WP_000072187.1 aga operon transcriptional regulator AgaR -
E3B71_RS14055 () 2443956..2445236 + 1281 WP_000681920.1 tagatose-bisphosphate aldolase subunit KbaZ -
E3B71_RS14060 () 2445259..2445732 + 474 WP_001336162.1 PTS N-acetylgalactosamine transporter subunit IIB -
E3B71_RS14065 () 2445743..2446522 + 780 WP_000406209.1 PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC -
E3B71_RS14070 () 2446512..2447390 + 879 WP_001295548.1 PTS system mannose/fructose/sorbose family transporter subunit IID -
E3B71_RS14075 () 2447408..2447842 + 435 WP_000948824.1 PTS sugar transporter subunit IIA -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Escherichia coli str. K-12 substr. MC4100 Genomic island TA20080 HG738867 3504819..3516493 0.005
Escherichia coli str. K-12 substr. MG1655 Genomic island TA1047 NC_000913 3267854..3277801 0.001
Escherichia coli str. K-12 substr. W3110 Genomic island TA21455 NC_007779 3265982..3277656 0.005
Escherichia coli HS Genomic island TA22436 NC_009800 3314965..3326421 0.008
Escherichia coli str. K-12 substr. DH10B Genomic island TA22703 NC_010473 3363621..3373568 0.001
Escherichia coli BW2952 Genomic island TA23871 NC_012759 3153024..3162971 0.001
Escherichia coli DH1 Genomic island TA27421 NC_017638 3245760..3255707 0.001
Escherichia coli str. K-12 substr. MDS42 Genomic island TA29016 NC_020518 2741187..2751134 0.001
Escherichia coli BW25113 Genomic island TA48700 NZ_CP009273 3261213..3271160 0.001
Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 Genomic island TA68442 NZ_CP017979 3158126..3169800 0.005
Escherichia coli C Genomic island TA75057 NZ_CP020543 640607..652281 0.005
Escherichia coli strain DH5alpha Genomic island TA90495 NZ_CP025520 2121277..2131224 0.001
Escherichia coli str. K-12 substr. MC4100 strain K-12 Genomic island TA285025 NZ_HG738867 3504819..3516493 0.005