NZ_CP0242753423955..3433753

MGE detailed information

MGE type: Genomic_island        MGE length: 9799 bp
Accession: NZ_CP024275        Location: 3423955..3433753         Organism: Escherichia coli O6:H16 strain M9682-C1       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
COG40_RS17745 () 3419787..3421118 - 1332 WP_000107723.1 threonine/serine transporter TdcC -
COG40_RS17750 () 3421140..3422129 - 990 WP_000548347.1 bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB -
COG40_RS17760 () 3422228..3423166 - 939 WP_000104219.1 transcriptional regulator TdcA -
COG40_RS26450 () 3423481..3423699 + 219 WP_001301311.1 transcriptional activator TdcR -
COG40_RS17770 () 3423955..3424494 + 540 WP_000675733.1 hypothetical protein -
COG40_RS17775 () 3424516..3425703 + 1188 WP_032328502.1 YhaC family protein -
COG40_RS17785 () 3426613..3427758 - 1146 WP_001300387.1 glycerate 2-kinase -
COG40_RS17790 () 3427855..3428745 - 891 WP_001303675.1 2-hydroxy-3-oxopropionate reductase -
COG40_RS17795 () 3428775..3429545 - 771 WP_001058209.1 2-dehydro-3-deoxyglucarate aldolase -
COG40_RS17800 () 3429561..3430859 - 1299 WP_001705462.1 putative galactarate transporter VF
COG40_RS17805 () 3431234..3432805 + 1572 WP_001273790.1 galactarate dehydratase -
COG40_RS17810 () 3432954..3433289 + 336 WP_001307405.1 type II toxin-antitoxin system antitoxin PrlF Antitoxin Detail
COG40_RS17815 () 3433289..3433753 + 465 WP_000347273.1 type II toxin-antitoxin system ribonuclease toxin YhaV Toxin Detail
COG40_RS17820 () 3433808..3434617 - 810 WP_000072187.1 aga operon transcriptional regulator AgaR -
COG40_RS17830 () 3434866..3436146 + 1281 WP_000681920.1 tagatose-bisphosphate aldolase subunit KbaZ -
COG40_RS17835 () 3436169..3436642 + 474 WP_001336162.1 PTS N-acetylgalactosamine transporter subunit IIB -
COG40_RS17840 () 3436653..3437432 + 780 WP_000406208.1 PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC -
COG40_RS17845 () 3437422..3438300 + 879 WP_001705464.1 PTS system mannose/fructose/sorbose family transporter subunit IID -
COG40_RS17850 () 3438318..3438752 + 435 WP_000948842.1 PTS sugar transporter subunit IIA -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Escherichia coli str. K-12 substr. MC4100 Genomic island TA20080 HG738867 3504819..3516493 0.005
Escherichia coli str. K-12 substr. MG1655 Genomic island TA1047 NC_000913 3267854..3277801 0.001
Escherichia coli str. K-12 substr. W3110 Genomic island TA21455 NC_007779 3265982..3277656 0.005
Escherichia coli HS Genomic island TA22436 NC_009800 3314965..3326421 0.008
Escherichia coli str. K-12 substr. DH10B Genomic island TA22703 NC_010473 3363621..3373568 0.001
Escherichia coli BW2952 Genomic island TA23871 NC_012759 3153024..3162971 0.001
Escherichia coli DH1 Genomic island TA27421 NC_017638 3245760..3255707 0.001
Escherichia coli str. K-12 substr. MDS42 Genomic island TA29016 NC_020518 2741187..2751134 0.001
Escherichia coli BW25113 Genomic island TA48700 NZ_CP009273 3261213..3271160 0.001
Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 Genomic island TA68442 NZ_CP017979 3158126..3169800 0.005
Escherichia coli C Genomic island TA75057 NZ_CP020543 640607..652281 0.005
Escherichia coli strain DH5alpha Genomic island TA90495 NZ_CP025520 2121277..2131224 0.001
Escherichia coli str. K-12 substr. MC4100 strain K-12 Genomic island TA285025 NZ_HG738867 3504819..3516493 0.005