NZ_CP021683283278..294952

MGE detailed information

MGE type: Genomic_island        MGE length: 11675 bp
Accession: NZ_CP021683        Location: 283278..294952         Organism: Escherichia coli strain AR_0162       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
AM408_RS02545 () 278279..278713 - 435 WP_000948824.1 PTS sugar transporter subunit IIA -
AM408_RS02550 () 278731..279609 - 879 WP_001295548.1 PTS system mannose/fructose/sorbose family transporter subunit IID -
AM408_RS02555 () 279599..280378 - 780 WP_000406209.1 PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC -
AM408_RS02560 () 280389..280862 - 474 WP_001336162.1 PTS N-acetylgalactosamine transporter subunit IIB -
AM408_RS02565 () 280885..282165 - 1281 WP_000681920.1 tagatose-bisphosphate aldolase subunit KbaZ -
AM408_RS02575 () 282414..283223 + 810 WP_000072187.1 aga operon transcriptional regulator AgaR -
AM408_RS02580 () 283278..283742 - 465 WP_000347275.1 type II toxin-antitoxin system ribonuclease toxin YhaV Toxin Detail
AM408_RS02585 () 283742..284077 - 336 WP_001307405.1 type II toxin-antitoxin system antitoxin PrlF Antitoxin Detail
AM408_RS02590 () 284226..285797 - 1572 WP_001273752.1 galactarate dehydratase -
AM408_RS02595 () 286172..287506 + 1335 WP_000599636.1 galactarate/glucarate/glycerate transporter GarP -
AM408_RS02600 () 287522..288292 + 771 WP_001058209.1 2-dehydro-3-deoxyglucarate aldolase -
AM408_RS02605 () 288322..289212 + 891 WP_001303675.1 2-hydroxy-3-oxopropionate reductase -
AM408_RS02610 () 289309..290454 + 1146 WP_001300387.1 glycerate 2-kinase -
AM408_RS02620 () 291477..292664 - 1188 WP_000484594.1 YhaC family protein -
AM408_RS02625 () 292686..293225 - 540 WP_000675733.1 hypothetical protein -
AM408_RS26925 () 293481..293699 - 219 WP_001301311.1 transcriptional activator TdcR -
AM408_RS02635 () 294014..294952 + 939 WP_000104207.1 transcriptional regulator TdcA -
AM408_RS02640 () 295051..296040 + 990 WP_000548347.1 bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB -
AM408_RS02645 () 296062..297393 + 1332 WP_000107723.1 threonine/serine transporter TdcC -
AM408_RS02650 () 297419..298627 + 1209 WP_001295545.1 propionate kinase -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Escherichia coli K-12 strain ER3413 Genomic island TA20042 CP009789 3247092..3263092 0.009
Escherichia coli str. K-12 substr. MC4100 Genomic island TA20080 HG738867 3504819..3516493 0.001
Escherichia coli str. K-12 substr. MG1655 Genomic island TA1047 NC_000913 3267854..3277801 0.005
Escherichia coli str. K-12 substr. W3110 Genomic island TA21455 NC_007779 3265982..3277656 0.001
Escherichia coli HS Genomic island TA22436 NC_009800 3314965..3326421 0.004
Escherichia coli str. K-12 substr. DH10B Genomic island TA22703 NC_010473 3363621..3373568 0.005
Escherichia coli BW2952 Genomic island TA23871 NC_012759 3153024..3162971 0.005
Escherichia coli DH1 Genomic island TA27421 NC_017638 3245760..3255707 0.005
Escherichia coli str. K-12 substr. MDS42 Genomic island TA29016 NC_020518 2741187..2751134 0.005
Escherichia coli BW25113 Genomic island TA48700 NZ_CP009273 3261213..3271160 0.005
Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 Genomic island TA68442 NZ_CP017979 3158126..3169800 0.001
Escherichia coli C Genomic island TA75057 NZ_CP020543 640607..652281 0.001
Escherichia coli strain DH5alpha Genomic island TA90495 NZ_CP025520 2121277..2131224 0.005
Escherichia coli str. K-12 substr. MC4100 strain K-12 Genomic island TA285025 NZ_HG738867 3504819..3516493 0.001