NZ_CP0197783607381..3617328

MGE detailed information

MGE type: Genomic_island        MGE length: 9948 bp
Accession: NZ_CP019778        Location: 3607381..3617328         Organism: Escherichia coli strain NCTC86       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
B0915_RS18495 () 3603213..3604544 - 1332 WP_000107723.1 threonine/serine transporter TdcC -
B0915_RS18500 () 3604566..3605555 - 990 WP_000548347.1 bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB -
B0915_RS18505 () 3605654..3606592 - 939 WP_000104211.1 transcriptional regulator TdcA -
B0915_RS27135 () 3606907..3607125 + 219 WP_001301311.1 transcriptional activator TdcR -
B0915_RS18515 () 3607381..3607920 + 540 WP_000675733.1 hypothetical protein -
B0915_RS18520 () 3607942..3609129 + 1188 WP_000484598.1 YhaC family protein -
B0915_RS18530 () 3610152..3611297 - 1146 WP_001300387.1 glycerate 2-kinase -
B0915_RS18535 () 3611394..3612284 - 891 WP_001303675.1 2-hydroxy-3-oxopropionate reductase -
B0915_RS18540 () 3612314..3613084 - 771 WP_001058209.1 2-dehydro-3-deoxyglucarate aldolase -
B0915_RS18545 () 3613100..3614434 - 1335 WP_000599636.1 galactarate/glucarate/glycerate transporter GarP -
B0915_RS18550 () 3614809..3616380 + 1572 WP_001273753.1 galactarate dehydratase -
B0915_RS18555 () 3616529..3616864 + 336 WP_001307405.1 type II toxin-antitoxin system antitoxin PrlF Antitoxin Detail
B0915_RS18560 () 3616864..3617328 + 465 WP_000347275.1 type II toxin-antitoxin system ribonuclease toxin YhaV Toxin Detail
B0915_RS18565 () 3617383..3618192 - 810 WP_000072187.1 aga operon transcriptional regulator AgaR -
B0915_RS18575 () 3618441..3619721 + 1281 WP_000681920.1 tagatose-bisphosphate aldolase subunit KbaZ -
B0915_RS18580 () 3619744..3620217 + 474 WP_001336162.1 PTS N-acetylgalactosamine transporter subunit IIB -
B0915_RS18585 () 3620228..3621007 + 780 WP_000406209.1 PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC -
B0915_RS18590 () 3620997..3621875 + 879 WP_001295548.1 PTS system mannose/fructose/sorbose family transporter subunit IID -
B0915_RS18595 () 3621893..3622327 + 435 WP_000948824.1 PTS sugar transporter subunit IIA -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Escherichia coli str. K-12 substr. MC4100 Genomic island TA20080 HG738867 3504819..3516493 0.005
Escherichia coli str. K-12 substr. MG1655 Genomic island TA1047 NC_000913 3267854..3277801 0.001
Escherichia coli str. K-12 substr. W3110 Genomic island TA21455 NC_007779 3265982..3277656 0.005
Escherichia coli HS Genomic island TA22436 NC_009800 3314965..3326421 0.008
Escherichia coli str. K-12 substr. DH10B Genomic island TA22703 NC_010473 3363621..3373568 0.001
Escherichia coli BW2952 Genomic island TA23871 NC_012759 3153024..3162971 0.001
Escherichia coli DH1 Genomic island TA27421 NC_017638 3245760..3255707 0.001
Escherichia coli str. K-12 substr. MDS42 Genomic island TA29016 NC_020518 2741187..2751134 0.001
Escherichia coli BW25113 Genomic island TA48700 NZ_CP009273 3261213..3271160 0.001
Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 Genomic island TA68442 NZ_CP017979 3158126..3169800 0.005
Escherichia coli C Genomic island TA75057 NZ_CP020543 640607..652281 0.005
Escherichia coli strain DH5alpha Genomic island TA90495 NZ_CP025520 2121277..2131224 0.001
Escherichia coli str. K-12 substr. MC4100 strain K-12 Genomic island TA285025 NZ_HG738867 3504819..3516493 0.005