MGE detailed information

MGE type: Integrative_Conjugative_Elements        MGE length: 155641 bp
Accession: NZ_CP007497        Location: 808718..964358         Organism: Streptococcus suis strain ZY05719 isolate diseased pig       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
ZY05719_RS03960 (ZY05719_03970) 804513..804887 + 375 WP_002934959.1 DUF1149 family protein -
ZY05719_RS03965 (ZY05719_03975) 804889..805740 + 852 WP_011922353.1 DegV family protein -
ZY05719_RS03970 (ZY05719_03980) 805749..806516 + 768 WP_011922354.1 4-hydroxy-tetrahydrodipicolinate reductase -
ZY05719_RS03975 (ZY05719_03985) 806513..807724 + 1212 WP_011922355.1 CCA tRNA nucleotidyltransferase -
ZY05719_RS03980 (ZY05719_03990) 807717..809585 + 1869 WP_011922356.1 ABC-F family ATP-binding cassette domain-containing protein -
ZY05719_RS03985 (ZY05719_03995) 809586..809921 + 336 WP_002934966.1 hypothetical protein -
ZY05719_RS03990 (ZY05719_04000) 810017..810976 + 960 WP_012775086.1 ROK family glucokinase -
ZY05719_RS03995 (ZY05719_04005) 811102..811380 + 279 WP_012775087.1 hypothetical protein -
ZY05719_RS04000 (ZY05719_04010) 811392..811694 + 303 WP_012775088.1 hypothetical protein -
ZY05719_RS04005 (ZY05719_04015) 811747..812586 + 840 WP_011922359.1 thymidylate synthase -
ZY05719_RS04010 (ZY05719_04020) 812872..813384 + 513 WP_011922360.1 dihydrofolate reductase -
ZY05719_RS04020 (ZY05719_04030) 813582..814808 + 1227 WP_002934974.1 ATP-dependent Clp protease ATP-binding subunit ClpX -
ZY05719_RS04025 (ZY05719_04035) 814864..815451 + 588 WP_012775089.1 ribosome biogenesis GTP-binding protein YihA/YsxC -
ZY05719_RS04030 (ZY05719_04040) 815474..815887 + 414 WP_012028095.1 nucleoside-diphosphate kinase -
ZY05719_RS04035 (ZY05719_04045) 815991..816662 + 672 WP_011922364.1 HIRAN domain-containing protein -
ZY05719_RS04040 (ZY05719_04050) 816944..818776 + 1833 WP_002943192.1 translation elongation factor 4 -
ZY05719_RS04045 (ZY05719_04055) 818826..819008 - 183 WP_002934978.1 4-oxalocrotonate tautomerase -
ZY05719_RS04050 (ZY05719_04060) 819143..820450 + 1308 WP_012028097.1 excalibur calcium-binding domain-containing protein -
ZY05719_RS04060 (ZY05719_04070) 820835..821416 + 582 WP_012028098.1 thymidine kinase -
ZY05719_RS04065 (ZY05719_04075) 821867..822946 + 1080 WP_012775090.1 peptide chain release factor 1 -
ZY05719_RS04070 (ZY05719_04080) 822946..823779 + 834 WP_011922371.1 peptide chain release factor N(5)-glutamine methyltransferase -
ZY05719_RS04075 (ZY05719_04085) 823766..824374 + 609 WP_011922372.1 threonylcarbamoyl-AMP synthase -
ZY05719_RS04080 (ZY05719_04090) 824371..824802 + 432 WP_011922373.1 GNAT family N-acetyltransferase -
ZY05719_RS04085 (ZY05719_04095) 824826..826085 + 1260 WP_011922374.1 serine hydroxymethyltransferase -
ZY05719_RS04090 (ZY05719_04100) 826085..827059 + 975 WP_002943200.1 nucleoid-associated protein -
ZY05719_RS04095 (ZY05719_04105) 827060..827659 + 600 WP_011922375.1 lysozyme family protein -
ZY05719_RS04100 (ZY05719_04110) 827760..828518 + 759 WP_002943202.1 Protease 4 VF
ZY05719_RS04105 (ZY05719_04115) 828535..829284 + 750 WP_011922377.1 translation initiation factor 1 -
ZY05719_RS04110 (ZY05719_04120) 829306..829659 + 354 WP_002943204.1 HIRAN domain-containing protein -
ZY05719_RS04115 (ZY05719_04125) 829680..830627 - 948 WP_011922378.1 hypothetical protein -
ZY05719_RS04120 (ZY05719_04130) 830655..831443 - 789 WP_012775093.1 hypothetical protein -
ZY05719_RS04125 (ZY05719_04135) 831639..833336 + 1698 WP_012775094.1 AAA family ATPase -
ZY05719_RS04130 (ZY05719_04140) 833333..834382 + 1050 WP_011922381.1 5-methylcytosine-specific restriction endonuclease system specificity protein McrC -
ZY05719_RS04135 (ZY05719_04145) 834588..835898 - 1311 WP_011922382.1 Putative S-adenosyl-L-methionine-dependent methyltransferase ; Integrase Integrase
ZY05719_RS04140 (ZY05719_04150) 835870..836103 - 234 WP_011922383.1 DUF3173 domain-containing protein -
ZY05719_RS04145 (ZY05719_04155) 836081..837319 - 1239 WP_014636592.1 replication initiation protein -
ZY05719_RS04150 (ZY05719_04160) 837829..838353 - 525 WP_011922385.1 hypothetical protein -
ZY05719_RS04155 (ZY05719_04165) 838381..838686 - 306 WP_012775097.1 hypothetical protein -
ZY05719_RS04160 (ZY05719_04170) 838939..840240 + 1302 WP_012775098.1 hypothetical protein -
ZY05719_RS04165 (ZY05719_04175) 840265..840471 - 207 WP_012775099.1 helix-turn-helix domain-containing protein -
ZY05719_RS04170 (ZY05719_04180) 840588..841565 + 978 WP_011922387.1 membrane protein -
ZY05719_RS04175 (ZY05719_04185) 841581..842420 + 840 WP_011922388.1 hypothetical protein -
ZY05719_RS04180 (ZY05719_04190) 842437..842841 + 405 WP_012028114.1 hypothetical protein -
ZY05719_RS04185 (ZY05719_04195) 842996..844018 + 1023 WP_012775100.1 hypothetical protein -
ZY05719_RS04190 (ZY05719_04200) 844008..845624 + 1617 WP_011922392.1 hypothetical protein -
ZY05719_RS04195 (ZY05719_04205) 845835..847385 - 1551 WP_002934999.1 glutamine-hydrolyzing GMP synthase -
ZY05719_RS04200 (ZY05719_04210) 847661..848359 + 699 WP_002943214.1 GntR family transcriptional regulator -
ZY05719_RS04205 (ZY05719_04215) 848462..848794 + 333 WP_002935001.1 putative DNA-binding protein -
ZY05719_RS04210 (ZY05719_04220) 848807..850345 + 1539 WP_011922394.1 signal recognition particle protein -
ZY05719_RS04215 (ZY05719_04225) 850539..851207 + 669 WP_011922395.1 SatD family protein -
ZY05719_RS04220 (ZY05719_04230) 851211..851951 + 741 WP_011922396.1 DUF3307 domain-containing protein -
ZY05719_RS04225 (ZY05719_04235) 852016..852453 + 438 WP_011922397.1 AAA family ATPase -
ZY05719_RS10505 853104..853409 + 306 WP_015445217.1 Abi family protein -
ZY05719_RS10510 853457..854065 + 609 Protein_774 Abi family protein -
ZY05719_RS04235 (ZY05719_04245) 854426..855496 + 1071 WP_012775101.1 putative 3-hydroxyisobutyrate dehydrogenase ; Integrase Integrase
ZY05719_RS04240 (ZY05719_04250) 855566..857074 - 1509 WP_011922400.1 Acyl-CoA dehydrogenase VF
ZY05719_RS04245 (ZY05719_04255) 857150..858091 - 942 WP_012775102.1 sensor histidine kinase -
ZY05719_RS04250 (ZY05719_04260) 858088..858753 - 666 WP_012775103.1 PE-PGRS family protein PE_PGRS11 VF
ZY05719_RS04255 (ZY05719_04265) 858792..859049 - 258 WP_011922404.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
ZY05719_RS04260 (ZY05719_04270) 859033..859284 - 252 WP_012775104.1 hypothetical protein Antitoxin Detail
ZY05719_RS04265 (ZY05719_04275) 859376..861346 - 1971 WP_012775105.1 FtsX-like permease family protein -
ZY05719_RS04270 (ZY05719_04280) 861347..862099 - 753 WP_011922409.1 putative transcriptional regulatory protein TcrX VF
ZY05719_RS04275 (ZY05719_04285) 862235..862969 - 735 WP_011922410.1 ABC transporter permease -
ZY05719_RS04280 (ZY05719_04290) 862971..863717 - 747 WP_011922411.1 ABC transporter permease -
ZY05719_RS04285 (ZY05719_04295) 863719..864621 - 903 WP_011922412.1 Vitamin B12 import ATP-binding protein BtuD VF
ZY05719_RS04290 (ZY05719_04300) 864642..865019 - 378 WP_011922413.1 NisI/SpaI family lantibiotic immunity lipoprotein -
ZY05719_RS04295 865032..865172 - 141 WP_012775106.1 hypothetical protein -
ZY05719_RS04300 (ZY05719_04310) 865312..866478 - 1167 WP_011922414.1 carbamoyl phosphate synthase large subunit -
ZY05719_RS04305 (ZY05719_04315) 866496..867242 - 747 WP_011922415.1 esterase family protein -
ZY05719_RS04310 (ZY05719_04320) 867273..868100 - 828 WP_011922416.1 alpha/beta hydrolase -
ZY05719_RS04315 (ZY05719_04325) 868214..869218 - 1005 WP_012775107.1 winged helix DNA-binding domain-containing protein -
ZY05719_RS04320 (ZY05719_04330) 869283..870119 - 837 WP_014636394.1 AraC family transcriptional regulator -
ZY05719_RS04325 (ZY05719_04335) 870196..871530 - 1335 WP_011922419.1 methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO -
ZY05719_RS04330 (ZY05719_04340) 871726..872475 - 750 WP_011922420.1 HAD family hydrolase -
ZY05719_RS04335 (ZY05719_04345) 872660..873859 - 1200 WP_012775108.1 putative oxidoreductase ; Integrase Integrase
ZY05719_RS04340 (ZY05719_04350) 873882..874109 - 228 WP_001258320.1 DUF3173 family protein -
ZY05719_RS04345 (ZY05719_04355) 874388..874609 - 222 WP_011922422.1 helix-turn-helix transcriptional regulator -
ZY05719_RS04350 (ZY05719_04360) 874939..876036 - 1098 WP_012028132.1 HAMP domain-containing histidine kinase -
ZY05719_RS04355 (ZY05719_04365) 876021..876704 - 684 WP_011922424.1 Glutathione hydrolase-like YwrD proenzyme VF
ZY05719_RS04360 (ZY05719_04370) 876735..877442 - 708 WP_012028134.1 ABC transporter permease -
ZY05719_RS04365 (ZY05719_04375) 877439..878230 - 792 WP_032509741.1 membrane protein -
ZY05719_RS04370 (ZY05719_04380) 878220..878936 - 717 WP_011922427.1 Vitamin B12 import ATP-binding protein BtuD VF
ZY05719_RS04375 (ZY05719_04385) 878957..881179 - 2223 WP_011922428.1 Adenylosuccinate lyase VF
ZY05719_RS04380 (ZY05719_04390) 881183..881434 - 252 WP_012775110.1 PqqD family protein -
ZY05719_RS04385 (ZY05719_04395) 881446..883173 - 1728 WP_024379090.1 asparagine synthetase -
ZY05719_RS10730 883289..883417 - 129 WP_012775112.1 hypothetical protein -
ZY05719_RS10735 883649..883771 - 123 WP_103557055.1 putative RiPP precursor -
ZY05719_RS04390 (ZY05719_04410) 884102..885967 - 1866 WP_011922430.1 relaxase/mobilization nuclease domain-containing protein -
ZY05719_RS04395 (ZY05719_04415) 885954..886319 - 366 WP_011922431.1 MobC family plasmid mobilization relaxosome protein -
ZY05719_RS04400 (ZY05719_04420) 886319..886684 - 366 WP_012775113.1 hypothetical protein -
ZY05719_RS04405 (ZY05719_04425) 887049..887945 + 897 WP_011922433.1 ATP-binding protein -
ZY05719_RS04410 (ZY05719_04430) 888067..889284 - 1218 WP_001291561.1 Tyrosine recombinase XerC ; Integrase Integrase
ZY05719_RS04415 (ZY05719_04435) 889366..889569 - 204 WP_000814511.1 excisionase -
ZY05719_RS04420 (ZY05719_04440) 890030..890260 - 231 WP_000857133.1 helix-turn-helix domain-containing protein -
ZY05719_RS04425 (ZY05719_04445) 890257..890679 - 423 WP_000804885.1 sigma-70 family RNA polymerase sigma factor -
ZY05719_RS04430 (ZY05719_04450) 891183..891536 + 354 WP_001227347.1 helix-turn-helix transcriptional regulator -
ZY05719_RS10520 891596..891763 - 168 WP_000336323.1 cysteine-rich KTR domain-containing protein -
ZY05719_RS04440 (ZY05719_04455) 891882..893801 - 1920 WP_001574275.1 Peptide chain release factor 3 VF
ZY05719_RS10525 893817..893933 - 117 WP_001791010.1 tetracycline resistance determinant leader peptide -
ZY05719_RS04445 (ZY05719_04460) 894178..895110 - 933 WP_001224319.1 conjugal transfer protein -
ZY05719_RS04450 (ZY05719_04465) 895107..896108 - 1002 WP_000769868.1 HTH-type transcriptional repressor YvoA VF
ZY05719_RS04455 (ZY05719_04470) 896105..898282 - 2178 WP_000804748.1 membrane protein -
ZY05719_RS04460 (ZY05719_04475) 898285..900732 - 2448 WP_000331160.1 ATP-binding protein -
ZY05719_RS04465 (ZY05719_04480) 900716..901222 - 507 WP_000506270.1 conjugal transfer protein -
ZY05719_RS04470 (ZY05719_04485) 901197..901694 - 498 WP_000342539.1 antirestriction protein ArdA -
ZY05719_RS04475 (ZY05719_04490) 901811..902032 - 222 WP_001009056.1 hypothetical protein -
ZY05719_RS04480 (ZY05719_04495) 902075..903280 - 1206 WP_000398284.1 replication initiation factor domain-containing protein -
ZY05719_RS10530 903303..903455 - 153 WP_000879507.1 hypothetical protein -
ZY05719_RS04485 (ZY05719_04500) 903458..904843 - 1386 WP_000813488.1 DNA translocase FtsK -
ZY05719_RS04490 (ZY05719_04505) 904872..905258 - 387 WP_000985015.1 YdcP family protein -
ZY05719_RS04495 (ZY05719_04510) 905274..905588 - 315 WP_000420682.1 YdcP family protein -
ZY05719_RS10750 905932..906249 + 318 Protein_832 ATP-binding protein -
ZY05719_RS04500 (ZY05719_04520) 906344..908161 - 1818 WP_012775114.1 ATP-dependent helicase -
ZY05719_RS04505 (ZY05719_04525) 908148..910235 - 2088 WP_011922436.1 AAA family ATPase -
ZY05719_RS04510 (ZY05719_04530) 910232..911008 - 777 WP_011922437.1 zeta toxin family protein Toxin Detail
ZY05719_RS04515 (ZY05719_04535) 911008..911484 - 477 WP_012775115.1 helix-turn-helix domain-containing protein Antitoxin Detail
ZY05719_RS04520 (ZY05719_04540) 911554..911844 - 291 WP_024379089.1 hypothetical protein -
ZY05719_RS04525 (ZY05719_04545) 911894..912283 - 390 WP_011922440.1 methyl-accepting chemotaxis protein -
ZY05719_RS04530 (ZY05719_04550) 912280..912507 - 228 WP_011922441.1 hypothetical protein -
ZY05719_RS04535 (ZY05719_04555) 912561..913637 - 1077 WP_011922442.1 toprim domain-containing protein -
ZY05719_RS04540 (ZY05719_04560) 913676..914314 - 639 WP_011922443.1 hypothetical protein -
ZY05719_RS04545 (ZY05719_04570) 915715..916314 - 600 WP_011922444.1 response regulator transcription factor -
ZY05719_RS04550 (ZY05719_04575) 916292..917800 - 1509 WP_012028145.1 ATP-binding protein -
ZY05719_RS04555 (ZY05719_04580) 917804..918493 - 690 WP_012775116.1 ABC transporter permease -
ZY05719_RS04560 (ZY05719_04585) 918503..919222 - 720 WP_012028147.1 ABC transporter permease -
ZY05719_RS04565 (ZY05719_04590) 919200..920114 - 915 WP_011922447.1 Vitamin B12 import ATP-binding protein BtuD VF
ZY05719_RS04570 (ZY05719_04595) 920086..922161 - 2076 WP_012028148.1 ATP-binding cassette domain-containing protein -
ZY05719_RS04575 (ZY05719_04600) 922167..923279 - 1113 WP_011922450.1 lantibiotic-modifying protein -
ZY05719_RS04580 (ZY05719_04605) 923807..924103 + 297 WP_002360685.1 hypothetical protein -
ZY05719_RS04585 (ZY05719_04610) 924104..924520 + 417 WP_000323438.1 hypothetical protein ; Integrase Integrase
ZY05719_RS04590 (ZY05719_04615) 924522..926084 + 1563 WP_000136908.1 Tn3 family transposase TnpR_Tn5403 Transposase
ZY05719_RS04595 (ZY05719_04620) 926227..926451 + 225 WP_000205227.1 helix-turn-helix transcriptional regulator Antitoxin Detail
ZY05719_RS04600 (ZY05719_04625) 926466..927335 + 870 WP_000233000.1 nucleotidyltransferase domain-containing protein Toxin Detail
ZY05719_RS04605 (ZY05719_04630) 927316..928050 + 735 WP_000662263.1 class I SAM-dependent methyltransferase -
ZY05719_RS04610 (ZY05719_04635) 928083..928946 + 864 WP_002294505.1 hypothetical protein ARG
ZY05719_RS04615 (ZY05719_04640) 928990..929517 + 528 WP_002294507.1 adenine phosphoribosyltransferase -
ZY05719_RS04620 (ZY05719_04645) 929745..931064 + 1320 WP_002338419.1 IS1380 family transposase ISSsu5 Transposase
ZY05719_RS04625 (ZY05719_04650) 931253..932650 - 1398 WP_011922451.1 DUF4135 domain-containing protein -
ZY05719_RS04630 932734..932907 - 174 WP_012775117.1 type A2 lantipeptide -
ZY05719_RS04635 (ZY05719_04660) 933248..933544 - 297 WP_012775118.1 hypothetical protein -
ZY05719_RS04640 (ZY05719_04665) 933558..933857 - 300 WP_011922452.1 hypothetical protein -
ZY05719_RS04645 (ZY05719_04670) 933928..940752 - 6825 WP_012775119.1 DEAD/DEAH box helicase family protein -
ZY05719_RS04650 (ZY05719_04675) 940802..941353 - 552 WP_012775120.1 hypothetical protein -
ZY05719_RS04655 (ZY05719_04680) 941337..941528 - 192 WP_011922455.1 calcium-binding protein -
ZY05719_RS04660 (ZY05719_04685) 941529..946424 - 4896 WP_012775121.1 hypothetical protein VF
ZY05719_RS04665 (ZY05719_04690) 946596..947186 + 591 WP_011922457.1 transcriptional regulator Antitoxin Detail
ZY05719_RS04670 (ZY05719_04695) 947183..948028 + 846 WP_011922458.1 nucleotidyl transferase AbiEii/AbiGii toxin family protein Toxin Detail
ZY05719_RS04675 (ZY05719_04700) 948091..950892 - 2802 WP_011922459.1 CHAP domain-containing protein -
ZY05719_RS04680 (ZY05719_04705) 950894..953245 - 2352 WP_011922460.1 ATPase AAA -
ZY05719_RS04685 (ZY05719_04710) 953202..953555 - 354 WP_012775123.1 PrgI family protein -
ZY05719_RS04690 (ZY05719_04715) 953617..954471 - 855 WP_011922462.1 conjugal transfer protein TrbL -
ZY05719_RS04695 (ZY05719_04720) 954490..954732 - 243 WP_001072182.1 hypothetical protein -
ZY05719_RS04700 (ZY05719_04725) 954750..956567 - 1818 WP_011922464.1 type IV secretory system conjugative DNA transfer family protein -
ZY05719_RS04705 (ZY05719_04730) 956567..957055 - 489 WP_012775124.1 hypothetical protein -
ZY05719_RS04710 (ZY05719_04735) 957133..957717 - 585 WP_012775125.1 CPBP family intramembrane metalloprotease -
ZY05719_RS04715 (ZY05719_04740) 957720..957953 - 234 WP_001005708.1 hypothetical protein -
ZY05719_RS04720 (ZY05719_04745) 957962..958345 - 384 WP_012775126.1 hypothetical protein -
ZY05719_RS04725 (ZY05719_04750) 958356..958784 - 429 WP_011922469.1 hypothetical protein -
ZY05719_RS04730 958768..960123 - 1356 WP_011922470.1 DNA (cytosine-5-)-methyltransferase -
ZY05719_RS04735 (ZY05719_04775) 960272..961090 - 819 WP_011922472.1 replication initiator protein A -
ZY05719_RS04740 961087..961260 - 174 WP_012775127.1 hypothetical protein -
ZY05719_RS04745 (ZY05719_04785) 961459..961824 - 366 WP_002936483.1 50S ribosomal protein L7/L12 -
ZY05719_RS04750 (ZY05719_04790) 961890..962384 - 495 WP_002936486.1 50S ribosomal protein L10 -
ZY05719_RS04755 (ZY05719_04795) 962961..965054 - 2094 WP_012775128.1 type I DNA topoisomerase -
ZY05719_RS04760 (ZY05719_04800) 965147..965989 - 843 WP_012775129.1 DNA-processing protein DprA -
ZY05719_RS04765 (ZY05719_04805) 966048..966605 - 558 WP_011922479.1 sugar O-acetyltransferase -
ZY05719_RS04770 (ZY05719_04810) 966616..966876 - 261 WP_009909865.1 metal-sensitive transcriptional regulator -
ZY05719_RS04775 (ZY05719_04815) 966983..967306 + 324 WP_012775130.1 rhodanese-like domain-containing protein -
ZY05719_RS04780 (ZY05719_04820) 967303..968961 + 1659 WP_011922481.1 FAD-dependent oxidoreductase -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Streptococcus suis SC84 Integrative and Conjugative Element TA23991, TA23992, TA23993, TA23994 NC_012924 808819..964460 0
Streptococcus suis SC84 Integrative and Conjugative Element TA23991, TA23992, TA23993, TA23994 NC_012924 808819..964460 0
Streptococcus suis strain SS2-1 Integrative and Conjugative Element TA70792, TA70793, TA70794, TA70795 NZ_CP018908 785098..940739 0
Streptococcus suis strain SC19 Integrative and Conjugative Element TA75581, TA75582, TA75583, TA75584 NZ_CP020863 808893..964533 0