NZ_AP024205608235..620692

MGE detailed information

MGE type: Genomic_island        MGE length: 12458 bp
Accession: NZ_AP024205        Location: 608235..620692         Organism: Escherichia coli strain TA8571       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
JG732_RS02905 () 603236..603670 - 435 WP_000948824.1 PTS sugar transporter subunit IIA -
JG732_RS02910 () 603688..604566 - 879 WP_001295548.1 PTS system mannose/fructose/sorbose family transporter subunit IID -
JG732_RS02915 () 604556..605335 - 780 WP_000406209.1 PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC -
JG732_RS02920 () 605346..605819 - 474 WP_001336162.1 PTS N-acetylgalactosamine transporter subunit IIB -
JG732_RS02925 () 605842..607122 - 1281 WP_000681920.1 tagatose-bisphosphate aldolase subunit KbaZ -
JG732_RS02930 () 607371..608180 + 810 WP_000072187.1 aga operon transcriptional regulator AgaR -
JG732_RS02935 () 608235..608699 - 465 WP_000347273.1 type II toxin-antitoxin system ribonuclease toxin YhaV Toxin Detail
JG732_RS02940 () 608699..609034 - 336 WP_001307405.1 type II toxin-antitoxin system antitoxin PrlF Antitoxin Detail
JG732_RS02945 () 609183..610754 - 1572 WP_063084662.1 galactarate dehydratase -
JG732_RS02950 () 611129..612463 + 1335 WP_000599636.1 galactarate/glucarate/glycerate transporter GarP -
JG732_RS02955 () 612479..613249 + 771 WP_001058209.1 2-dehydro-3-deoxyglucarate aldolase -
JG732_RS02960 () 613279..614169 + 891 WP_001303675.1 2-hydroxy-3-oxopropionate reductase -
JG732_RS02965 () 614266..615411 + 1146 WP_001300387.1 glycerate 2-kinase -
JG732_RS02975 () 616434..616730 - 297 Protein_585 hypothetical protein -
JG732_RS02980 () 616747..617444 - 698 Protein_586 IS1 family transposase -
JG732_RS02985 () 617478..618404 - 927 WP_072651221.1 hypothetical protein -
JG732_RS02990 () 618426..618965 - 540 WP_000675733.1 hypothetical protein -
JG732_RS02995 () 619221..619565 - 345 WP_089570127.1 transcriptional activator TdcR -
JG732_RS03000 () 619754..620692 + 939 WP_000104211.1 transcriptional regulator TdcA -
JG732_RS03005 () 620791..621780 + 990 WP_000548347.1 bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB -
JG732_RS03010 () 621802..623133 + 1332 WP_000107723.1 threonine/serine transporter TdcC -
JG732_RS03015 () 623159..624367 + 1209 WP_001295545.1 propionate kinase -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Escherichia coli K-12 strain ER3413 Genomic island TA20042 CP009789 3247092..3263092 0.01
Escherichia coli str. K-12 substr. MC4100 Genomic island TA20080 HG738867 3504819..3516493 0.002
Escherichia coli str. K-12 substr. MG1655 Genomic island TA1047 NC_000913 3267854..3277801 0.006
Escherichia coli str. K-12 substr. W3110 Genomic island TA21455 NC_007779 3265982..3277656 0.002
Escherichia coli HS Genomic island TA22436 NC_009800 3314965..3326421 0.005
Escherichia coli str. K-12 substr. DH10B Genomic island TA22703 NC_010473 3363621..3373568 0.006
Escherichia coli BW2952 Genomic island TA23871 NC_012759 3153024..3162971 0.006
Escherichia coli DH1 Genomic island TA27421 NC_017638 3245760..3255707 0.006
Escherichia coli str. K-12 substr. MDS42 Genomic island TA29016 NC_020518 2741187..2751134 0.006
Escherichia coli BW25113 Genomic island TA48700 NZ_CP009273 3261213..3271160 0.006
Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 Genomic island TA68442 NZ_CP017979 3158126..3169800 0.002
Escherichia coli C Genomic island TA75057 NZ_CP020543 640607..652281 0.002
Escherichia coli strain DH5alpha Genomic island TA90495 NZ_CP025520 2121277..2131224 0.006
Escherichia coli str. K-12 substr. MC4100 strain K-12 Genomic island TA285025 NZ_HG738867 3504819..3516493 0.002