NZ_AP0232193216684..3226631

MGE detailed information

MGE type: Genomic_island        MGE length: 9948 bp
Accession: NZ_AP023219        Location: 3216684..3226631         Organism: Escherichia coli strain M505       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
EPG46_RS15370 () 3212516..3213847 - 1332 WP_000107723.1 threonine/serine transporter TdcC -
EPG46_RS15375 () 3213869..3214858 - 990 WP_000548347.1 bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB -
EPG46_RS15380 () 3214957..3215895 - 939 WP_000104195.1 transcriptional regulator TdcA -
EPG46_RS15385 () 3216084..3216428 + 345 WP_000145840.1 transcriptional activator TdcR -
EPG46_RS15390 () 3216684..3217223 + 540 WP_000675733.1 hypothetical protein -
EPG46_RS15395 () 3217245..3218432 + 1188 WP_000484598.1 YhaC family protein -
EPG46_RS15405 () 3219455..3220600 - 1146 WP_001300387.1 glycerate 2-kinase -
EPG46_RS15410 () 3220697..3221587 - 891 WP_001303675.1 2-hydroxy-3-oxopropionate reductase -
EPG46_RS15415 () 3221617..3222387 - 771 WP_001058209.1 2-dehydro-3-deoxyglucarate aldolase -
EPG46_RS15420 () 3222403..3223737 - 1335 WP_000599636.1 galactarate/glucarate/glycerate transporter GarP -
EPG46_RS15425 () 3224112..3225683 + 1572 WP_001273752.1 galactarate dehydratase -
EPG46_RS15430 () 3225832..3226167 + 336 WP_001307405.1 type II toxin-antitoxin system antitoxin PrlF Antitoxin Detail
EPG46_RS15435 () 3226167..3226631 + 465 WP_000347275.1 type II toxin-antitoxin system ribonuclease toxin YhaV Toxin Detail
EPG46_RS15440 () 3226686..3227495 - 810 WP_000072187.1 aga operon transcriptional regulator AgaR -
EPG46_RS15445 () 3227744..3229024 + 1281 WP_000681920.1 tagatose-bisphosphate aldolase subunit KbaZ -
EPG46_RS15450 () 3229047..3229520 + 474 WP_001336162.1 PTS N-acetylgalactosamine transporter subunit IIB -
EPG46_RS15455 () 3229531..3230310 + 780 WP_000406209.1 PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC -
EPG46_RS15460 () 3230300..3231178 + 879 WP_001295548.1 PTS system mannose/fructose/sorbose family transporter subunit IID -
EPG46_RS15465 () 3231196..3231630 + 435 WP_000948824.1 PTS sugar transporter subunit IIA -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Escherichia coli str. K-12 substr. MC4100 Genomic island TA20080 HG738867 3504819..3516493 0.005
Escherichia coli str. K-12 substr. MG1655 Genomic island TA1047 NC_000913 3267854..3277801 0.001
Escherichia coli str. K-12 substr. W3110 Genomic island TA21455 NC_007779 3265982..3277656 0.005
Escherichia coli HS Genomic island TA22436 NC_009800 3314965..3326421 0.008
Escherichia coli str. K-12 substr. DH10B Genomic island TA22703 NC_010473 3363621..3373568 0.001
Escherichia coli BW2952 Genomic island TA23871 NC_012759 3153024..3162971 0.001
Escherichia coli DH1 Genomic island TA27421 NC_017638 3245760..3255707 0.001
Escherichia coli str. K-12 substr. MDS42 Genomic island TA29016 NC_020518 2741187..2751134 0.001
Escherichia coli BW25113 Genomic island TA48700 NZ_CP009273 3261213..3271160 0.001
Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 Genomic island TA68442 NZ_CP017979 3158126..3169800 0.005
Escherichia coli C Genomic island TA75057 NZ_CP020543 640607..652281 0.005
Escherichia coli strain DH5alpha Genomic island TA90495 NZ_CP025520 2121277..2131224 0.001
Escherichia coli str. K-12 substr. MC4100 strain K-12 Genomic island TA285025 NZ_HG738867 3504819..3516493 0.005