Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   ABC814_RS11385 Genome accession   NZ_CP155533
Coordinates   2203668..2204426 (+) Length   252 a.a.
NCBI ID   WP_000410384.1    Uniprot ID   C1CBL7
Organism   Streptococcus pneumoniae strain Spn1439-106     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2198668..2209426
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABC814_RS11355 (ABC814_11355) comE 2199264..2200016 (-) 753 WP_000866065.1 competence system response regulator transcription factor ComE Regulator
  ABC814_RS11360 (ABC814_11360) comD/comD1 2200013..2201338 (-) 1326 WP_015898772.1 competence system sensor histidine kinase ComD Regulator
  ABC814_RS11365 (ABC814_11365) comC/comC1 2201359..2201484 (-) 126 WP_000799689.1 competence-stimulating peptide ComC Regulator
  ABC814_RS11375 (ABC814_11375) rlmH 2201767..2202246 (-) 480 WP_000695929.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  ABC814_RS11380 (ABC814_11380) htrA 2202429..2203610 (+) 1182 WP_000681598.1 S1C family serine protease Regulator
  ABC814_RS11385 (ABC814_11385) spo0J 2203668..2204426 (+) 759 WP_000410384.1 ParB/RepB/Spo0J family partition protein Regulator
  ABC814_RS11390 (ABC814_11390) dnaA 2204639..2206000 (+) 1362 WP_000660618.1 chromosomal replication initiator protein DnaA -

Sequence

Protein


Download         Length: 252 a.a.        Molecular weight: 29183.53 Da        Isoelectric Point: 9.0667

>NTDB_id=997218 ABC814_RS11385 WP_000410384.1 2203668..2204426(+) (spo0J) [Streptococcus pneumoniae strain Spn1439-106]
MEKFEMISITDIQKNPYQPRKEFDREKLDELAQSIKENGVIQPIIVRQSPVIGYEILAGERRYRASLLAGLRSIPAVVKQ
ISDQEMMVQSIIENLQRENLNPIEEARAYESLVEKGFTHTEIADKMGKSRPYISNSIRLLSLPEQILSEVENGKLSQAHA
RSLVGLNKEQQDYFFQRIIEEDISVRKLEALLTEKKQKKQQKTNHFIQNEEKQLRKLLGLDVEIKLSKKDSGKIIISFSN
QEEYSRIINSLK

Nucleotide


Download         Length: 759 bp        

>NTDB_id=997218 ABC814_RS11385 WP_000410384.1 2203668..2204426(+) (spo0J) [Streptococcus pneumoniae strain Spn1439-106]
ATGGAAAAATTTGAAATGATTTCTATCACAGATATACAAAAAAATCCCTATCAACCCCGAAAAGAATTTGATAGAGAAAA
ACTAGATGAACTAGCACAGTCTATCAAAGAAAATGGGGTCATTCAACCGATTATTGTTCGTCAATCTCCTGTTATTGGTT
ATGAAATCCTTGCAGGAGAGAGACGCTATCGGGCTTCACTTTTAGCTGGTCTACGGTCTATCCCAGCTGTTGTTAAACAG
ATTTCAGACCAAGAGATGATGGTCCAGTCCATTATTGAAAATTTACAGAGAGAAAATTTAAACCCGATAGAAGAAGCACG
CGCCTATGAATCTCTCGTAGAGAAAGGATTCACCCATACTGAAATTGCAGATAAGATGGGCAAGTCTCGTCCATATATCA
GCAACTCCATTCGTTTACTTTCCTTGCCAGAACAGATTCTCTCAGAAGTAGAAAATGGCAAACTATCACAAGCCCATGCG
CGTTCCCTAGTTGGGTTAAATAAGGAACAACAAGACTATTTCTTTCAACGGATTATAGAAGAAGATATTTCTGTAAGGAA
GTTAGAAGCTCTTCTGACAGAGAAAAAACAAAAGAAACAGCAAAAAACTAATCATTTCATACAAAATGAAGAAAAACAGT
TAAGAAAACTACTCGGATTAGATGTAGAAATTAAACTATCTAAAAAAGACAGTGGAAAAATCATTATTTCTTTTTCAAAT
CAAGAAGAATATAGTAGAATTATCAACAGCCTGAAATAA

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(6-94)

HTH domain found in ParB protein (HTH_ParB)

(144-192)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB C1CBL7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

50.593

100

0.508

Multiple sequence alignment