Detailed information NTG0991086

Bioinformatically predicted

Overview

• Name: pilD
• Type: Machinery gene
• Locus tag: AAH427_RS21195
• Genome accession: NZ_CP153611
• Coordinates: 4270741..4271541 (+)
• Length: 266 a.a.
• NCBI ID: WP_373442900.1
• Uniprot ID: -
• Organism: Klebsiella pneumoniae strain Kpn148
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4265741..4276541

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAH427_RS21160 (AAH427_21100)	gspH	4265897..4266412 (+)	516	WP_004213437.1	type II secretion system minor pseudopilin GspH	-
AAH427_RS21165 (AAH427_21105)	gspI	4266409..4266774 (+)	366	WP_002889025.1	type II secretion system minor pseudopilin GspI	-
AAH427_RS21170 (AAH427_21110)	gspJ	4266771..4267367 (+)	597	WP_004222700.1	type II secretion system minor pseudopilin GspJ	-
AAH427_RS21175 (AAH427_21115)	gspK	4267364..4268350 (+)	987	WP_143934682.1	type II secretion system minor pseudopilin GspK	-
AAH427_RS21180 (AAH427_21120)	gspL	4268337..4269530 (+)	1194	WP_373442899.1	type II secretion system protein GspL	-
AAH427_RS21185 (AAH427_21125)	-	4269523..4270008 (+)	486	WP_004145896.1	type II secretion system protein M	-
AAH427_RS21190 (AAH427_21130)	-	4269998..4270744 (+)	747	WP_004145897.1	type II secretion system protein N	-
AAH427_RS21195 (AAH427_21135)	pilD	4270741..4271541 (+)	801	WP_373442900.1	A24 family peptidase	Machinery gene
AAH427_RS21200 (AAH427_21140)	hrpB	4271589..4274018 (-)	2430	WP_373442901.1	ATP-dependent helicase HrpB	-
AAH427_RS21205 (AAH427_21145)	thpR	4274091..4274627 (+)	537	WP_004145901.1	RNA 2',3'-cyclic phosphodiesterase	-
AAH427_RS21210 (AAH427_21150)	sfsA	4274627..4275343 (+)	717	WP_002888848.1	DNA/RNA nuclease SfsA	-
AAH427_RS21215 (AAH427_21155)	dksA	4275506..4275961 (+)	456	WP_002888845.1	RNA polymerase-binding protein DksA	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29369.02 Da
• Isoelectric Point: 8.8894

>NTDB_id=991086 AAH427_RS21195 WP_373442900.1 4270741..4271541(+) (pilD) [Klebsiella pneumoniae strain Kpn148]
MTTLAALSLHFPLVWYGFLLLFGLALGSFYNVVIYRLPRMLTQTADDERITLSTPGSSCPQCRQPIAWRDNIPLLSFLWL
GRRARCCQAPIAWSYPLTELATGLLFILAGALLAPGLPLAGGLVLLSFLLILARIDARTQLLPDRLTLPLLWAGLLFNLN
EVYIALPDAVAGAMAGYLALWSVYWLFRLLTGKEALGYGDFKLLAALGAWCGWQVLPQVLLLASASGLVWTLLQRLWTRQ
SLQQPLAFGPWLALAGGGIFLWQQMI

Nucleotide

• Length: 801 bp

>NTDB_id=991086 AAH427_RS21195 WP_373442900.1 4270741..4271541(+) (pilD) [Klebsiella pneumoniae strain Kpn148]
ATGACGACACTAGCCGCGTTATCGCTGCACTTTCCCCTTGTCTGGTATGGCTTTCTGCTGCTGTTCGGCCTGGCGCTGGG
CAGCTTTTACAATGTGGTGATCTATCGTCTGCCGCGCATGTTGACCCAGACCGCGGACGACGAGCGGATAACCCTCAGCA
CCCCGGGATCTTCCTGCCCGCAGTGCCGCCAGCCGATCGCCTGGCGGGACAATATCCCGCTGCTCAGTTTCCTCTGGCTG
GGCCGTCGCGCCCGCTGCTGTCAGGCGCCCATCGCGTGGAGCTATCCGCTGACCGAGCTGGCCACCGGCCTGCTGTTTAT
CCTCGCCGGAGCTTTGCTGGCGCCGGGCCTGCCGCTGGCGGGCGGCCTGGTGCTGCTCTCGTTCCTGCTGATACTGGCGC
GGATTGACGCCCGGACCCAGCTGCTGCCCGATCGCCTGACTCTGCCCCTGCTGTGGGCCGGGCTGCTGTTCAATCTTAAC
GAGGTGTACATTGCCCTGCCGGATGCGGTCGCCGGGGCGATGGCCGGTTATCTGGCGCTGTGGTCGGTCTACTGGCTGTT
CCGCCTGCTGACCGGGAAAGAGGCGCTGGGCTATGGCGATTTTAAGCTGCTGGCGGCGCTGGGCGCCTGGTGCGGCTGGC
AGGTTCTGCCGCAGGTGCTGTTGCTCGCTTCGGCCAGCGGGCTGGTGTGGACCCTACTGCAACGCCTGTGGACCCGGCAG
TCGCTGCAGCAGCCGCTGGCCTTCGGCCCCTGGCTGGCGCTGGCCGGCGGGGGTATTTTTCTCTGGCAGCAGATGATCTA
G

Domains

Predicted by InterproScan.

• Bacterial Peptidase A24 N-terminal domain (A24_N_bact) (21-109)

• Type IV leader peptidase family (Peptidase_A24) (123-231)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilD	Vibrio cholerae strain A1552	49.057	99.624	0.489
pilD	Vibrio campbellii strain DS40M4	46.545	100	0.481
pilD	Acinetobacter nosocomialis M2	46.388	98.872	0.459
pilD	Acinetobacter baumannii D1279779	45.627	98.872	0.451
pilD	Neisseria gonorrhoeae MS11	43.922	95.865	0.421