Detailed information NTG0098851

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: R8568_RS09750
• Genome accession: NZ_AP026931
• Coordinates: 1898629..1899033 (-)
• Length: 134 a.a.
• NCBI ID: WP_000588013.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain PZ900701541
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1893629..1904033

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R8568_RS09710 (PC1520_18910)	rnpA	1894043..1894414 (-)	372	WP_000739246.1	ribonuclease P protein component	-
R8568_RS09715	-	1894431..1894562 (-)	132	WP_000768904.1	hypothetical protein	-
R8568_RS09720 (PC1520_18920)	-	1894563..1895753 (-)	1191	WP_000167766.1	acetate kinase	-
R8568_RS09725 (PC1520_18930)	comYH	1895804..1896757 (-)	954	WP_000345101.1	class I SAM-dependent methyltransferase	Machinery gene
R8568_RS09730	-	1896818..1897412 (-)	595	Protein_1892	class I SAM-dependent methyltransferase	-
R8568_RS09735 (PC1520_18960)	comGG/cglG	1897549..1897962 (-)	414	WP_000265624.1	competence type IV pilus minor pilin ComGG	Machinery gene
R8568_RS09740 (PC1520_18970)	comGF/cglF	1897940..1898401 (-)	462	WP_000250542.1	competence type IV pilus minor pilin ComGF	Machinery gene
R8568_RS09745 (PC1520_18980)	comGE/cglE	1898364..1898666 (-)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
R8568_RS09750 (PC1520_18990)	comGD/cglD	1898629..1899033 (-)	405	WP_000588013.1	competence type IV pilus minor pilin ComGD	Machinery gene
R8568_RS09755 (PC1520_19000)	comGC/cglC	1899026..1899352 (-)	327	WP_000738626.1	comG operon protein ComGC	Machinery gene
R8568_RS09760 (PC1520_19010)	comGB/cglB	1899354..1900370 (-)	1017	WP_078375398.1	competence type IV pilus assembly protein ComGB	Machinery gene
R8568_RS09765 (PC1520_19020)	comGA/cglA/cilD	1900318..1901259 (-)	942	WP_000249567.1	competence type IV pilus ATPase ComGA	Machinery gene
R8568_RS09770 (PC1520_19030)	-	1901335..1901700 (-)	366	WP_000286415.1	DUF1033 family protein	-
R8568_RS09775 (PC1520_19040)	-	1901851..1902909 (-)	1059	WP_000649473.1	zinc-dependent alcohol dehydrogenase family protein	-

Sequence

Protein

• Length: 134 a.a.
• Molecular weight: 14665.85 Da
• Isoelectric Point: 10.2164

>NTDB_id=98851 R8568_RS09750 WP_000588013.1 1898629..1899033(-) (comGD/cglD) [Streptococcus pneumoniae strain PZ900701541]
MIKAFTMLESLLVLGLVSILALGLSGSVQSTFAAVEEQIFFMEFEELYRETQKRSVASQQKTNLNLDGQTLSNGSQKLTV
PKGIQAPSGQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 405 bp

>NTDB_id=98851 R8568_RS09750 WP_000588013.1 1898629..1899033(-) (comGD/cglD) [Streptococcus pneumoniae strain PZ900701541]
ATGATTAAGGCCTTTACCATGCTGGAAAGTCTCTTGGTTTTGGGTCTTGTGAGTATCCTTGCCTTGGGCTTGTCCGGCTC
TGTTCAGTCCACTTTTGCGGCGGTAGAGGAACAGATTTTCTTTATGGAGTTTGAAGAACTCTATCGGGAAACCCAAAAAC
GCAGTGTAGCCAGTCAGCAAAAGACTAATCTAAATTTAGATGGGCAGACGCTTAGCAATGGCAGTCAAAAGTTGACAGTT
CCTAAAGGAATTCAGGCACCATCAGGCCAAAGTATTACATTTGACCGAGCTGGGGGCAATTCGTCCCTGGCTAAGGTTGA
ATTTCAGACCAGTAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATGGAAAAATTAAACGCATTAAGGAAACAAAAA
ATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus pneumoniae TIGR4	97.761	100	0.978
comGD/cglD	Streptococcus pneumoniae Rx1	97.015	100	0.97
comGD/cglD	Streptococcus pneumoniae D39	97.015	100	0.97
comGD/cglD	Streptococcus pneumoniae R6	97.015	100	0.97
comGD/cglD	Streptococcus mitis SK321	96.269	100	0.963
comGD/cglD	Streptococcus mitis NCTC 12261	96.992	99.254	0.963
comYD	Streptococcus gordonii str. Challis substr. CH1	58.268	94.776	0.552
comYD	Streptococcus mutans UA140	49.219	95.522	0.47
comYD	Streptococcus mutans UA159	49.219	95.522	0.47