Detailed information NTG0098776

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: R8624_RS09440
• Genome accession: NZ_AP026930
• Coordinates: 1825454..1825858 (-)
• Length: 134 a.a.
• NCBI ID: WP_050311717.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain PZ900701208
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1820454..1830858

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R8624_RS09400 (PC1195_18270)	rnpA	1820869..1821240 (-)	372	WP_000739246.1	ribonuclease P protein component	-
R8624_RS09405	-	1821257..1821388 (-)	132	WP_000768904.1	hypothetical protein	-
R8624_RS09410 (PC1195_18280)	-	1821389..1822579 (-)	1191	WP_000167766.1	acetate kinase	-
R8624_RS09415 (PC1195_18290)	comYH	1822630..1823583 (-)	954	WP_050311715.1	class I SAM-dependent methyltransferase	Machinery gene
R8624_RS09420	-	1823644..1824238 (-)	595	Protein_1832	class I SAM-dependent methyltransferase	-
R8624_RS09425 (PC1195_18320)	comGG/cglG	1824341..1824787 (-)	447	WP_050311716.1	competence type IV pilus minor pilin ComGG	Machinery gene
R8624_RS09430 (PC1195_18330)	comGF/cglF	1824765..1825226 (-)	462	WP_050120523.1	competence type IV pilus minor pilin ComGF	Machinery gene
R8624_RS09435 (PC1195_18340)	comGE/cglE	1825189..1825491 (-)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
R8624_RS09440 (PC1195_18350)	comGD/cglD	1825454..1825858 (-)	405	WP_050311717.1	competence type IV pilus minor pilin ComGD	Machinery gene
R8624_RS09445 (PC1195_18360)	comGC/cglC	1825851..1826177 (-)	327	WP_000738626.1	comG operon protein ComGC	Machinery gene
R8624_RS09450 (PC1195_18370)	comGB/cglB	1826179..1827195 (-)	1017	WP_074017570.1	competence type IV pilus assembly protein ComGB	Machinery gene
R8624_RS09455 (PC1195_18380)	comGA/cglA/cilD	1827143..1828084 (-)	942	WP_000249571.1	competence type IV pilus ATPase ComGA	Machinery gene
R8624_RS09460 (PC1195_18390)	-	1828160..1828525 (-)	366	WP_000286415.1	DUF1033 family protein	-
R8624_RS09465 (PC1195_18400)	-	1828676..1829734 (-)	1059	WP_000649468.1	zinc-dependent alcohol dehydrogenase family protein	-

Sequence

Protein

• Length: 134 a.a.
• Molecular weight: 14654.88 Da
• Isoelectric Point: 10.2164

>NTDB_id=98776 R8624_RS09440 WP_050311717.1 1825454..1825858(-) (comGD/cglD) [Streptococcus pneumoniae strain PZ900701208]
MIKAFTMLESLLVLGLVSILALGLSGSVQSTFSAVEEQIFFMEFEELYREAQKRSVASQQKTSLNLDGQMISNGSQKLTV
PKGIQAPSGQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 405 bp

>NTDB_id=98776 R8624_RS09440 WP_050311717.1 1825454..1825858(-) (comGD/cglD) [Streptococcus pneumoniae strain PZ900701208]
ATGATTAAGGCCTTTACCATGCTGGAAAGTCTCTTGGTTTTGGGACTTGTGAGTATCCTTGCCTTGGGCTTGTCCGGCTC
TGTCCAGTCCACTTTTTCAGCGGTAGAGGAACAGATTTTCTTTATGGAGTTTGAAGAACTCTATCGGGAAGCCCAAAAAC
GCAGTGTAGCTAGTCAACAAAAGACTAGTCTGAACTTGGATGGGCAGATGATTAGCAATGGCAGTCAAAAGTTGACAGTT
CCTAAAGGAATTCAGGCACCATCAGGCCAAAGTATTACATTTGACCGAGCTGGGGGCAATTCGTCCCTGGCTAAGGTTGA
ATTTCAGACCAGTAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATGGAAAAATTAAACGCATTAAGGAAACAAAAA
ATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus pneumoniae D39	99.254	100	0.993
comGD/cglD	Streptococcus pneumoniae R6	99.254	100	0.993
comGD/cglD	Streptococcus pneumoniae Rx1	99.254	100	0.993
comGD/cglD	Streptococcus pneumoniae TIGR4	97.015	100	0.97
comGD/cglD	Streptococcus mitis NCTC 12261	96.241	99.254	0.955
comGD/cglD	Streptococcus mitis SK321	95.522	100	0.955
comYD	Streptococcus gordonii str. Challis substr. CH1	59.055	94.776	0.56
comYD	Streptococcus mutans UA140	48.438	95.522	0.463
comYD	Streptococcus mutans UA159	48.438	95.522	0.463