Detailed information
Bioinformatically predicted
Overview
| Name | comA/nlmT | Type | Regulator |
| Locus tag | R8624_RS02395 | Genome accession | NZ_AP026930 |
| Coordinates | 464134..464841 (-) | Length | 235 a.a. |
| NCBI ID | WP_317650242.1 | Uniprot ID | - |
| Organism | Streptococcus pneumoniae strain PZ900701208 | ||
| Function | transport of ComC (predicted from homology) Competence regulation |
||
Genomic Context
Location: 459134..469841
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8624_RS02360 (PC1195_04520) | - | 459155..459493 (+) | 339 | WP_000682121.1 | LytTR family DNA-binding domain-containing protein | - |
| R8624_RS02365 (PC1195_04530) | comE/blpR | 459498..460235 (+) | 738 | WP_001219126.1 | response regulator transcription factor | Regulator |
| R8624_RS02370 (PC1195_04540) | - | 460248..461588 (+) | 1341 | WP_000275285.1 | sensor histidine kinase | - |
| R8624_RS02375 (PC1195_04550) | blpC | 461633..461788 (-) | 156 | WP_000358814.1 | quorum-sensing system pheromone BlpC | - |
| R8624_RS02380 (PC1195_04560) | - | 461845..463206 (-) | 1362 | WP_050311724.1 | bacteriocin secretion accessory protein | - |
| R8624_RS02385 (PC1195_04570) | comA | 463217..463486 (-) | 270 | WP_317650355.1 | hypothetical protein | Regulator |
| R8624_RS02390 (PC1195_04580) | comA/nlmT | 463462..463929 (-) | 468 | WP_317650241.1 | ATP-binding cassette domain-containing protein | Regulator |
| R8624_RS02395 (PC1195_04590) | comA/nlmT | 464134..464841 (-) | 708 | WP_317650242.1 | ABC transporter transmembrane domain-containing protein | Regulator |
| R8624_RS02400 (PC1195_04600) | comA/nlmT | 464786..465373 (-) | 588 | WP_000205166.1 | cysteine peptidase family C39 domain-containing protein | Regulator |
| R8624_RS02405 (PC1195_04610) | blpI | 465655..465852 (+) | 198 | WP_001093259.1 | bacteriocin-like peptide BlpI | - |
| R8624_RS02410 (PC1195_04630) | blpJ | 466319..466588 (+) | 270 | WP_001093248.1 | bacteriocin-like peptide BlpJ | - |
| R8624_RS02415 (PC1195_04640) | blpU | 466657..466887 (+) | 231 | WP_050243503.1 | bacteriocin-like peptide BlpU | - |
| R8624_RS02420 | - | 466890..467009 (+) | 120 | WP_050233614.1 | PncF family bacteriocin immunity protein | - |
| R8624_RS02425 (PC1195_04650) | - | 467306..467470 (+) | 165 | WP_000727118.1 | hypothetical protein | - |
| R8624_RS02430 (PC1195_04660) | - | 467467..467871 (+) | 405 | WP_050311725.1 | hypothetical protein | - |
| R8624_RS02435 (PC1195_04680) | - | 468500..468883 (+) | 384 | WP_000877381.1 | hypothetical protein | - |
| R8624_RS02440 (PC1195_04690) | - | 468935..469624 (+) | 690 | WP_000760515.1 | CPBP family intramembrane glutamic endopeptidase | - |
Sequence
Protein
Download Length: 235 a.a. Molecular weight: 26620.22 Da Isoelectric Point: 4.6670
>NTDB_id=98729 R8624_RS02395 WP_317650242.1 464134..464841(-) (comA/nlmT) [Streptococcus pneumoniae strain PZ900701208]
MVTIINIGGSYYLQGILDEYIPNQMKSTLGIISVGLVITDILQQVMSFSRDYLLTVLSQRLSIDVILSYIRHIFELPMSF
FATRRTGEIISRFTDANSIIDALASTILSLFLDVSILILVEGVLLAQNPNLFLLSLISIPIYMFIIFSFMKPFEKMNHDV
MQSNSMVSSAIIEDINGIETIKSLTSEENRYQNIDSEFVDYLEKSFKLSKYSILQTSLKQGTKLVLNILILWFGA
MVTIINIGGSYYLQGILDEYIPNQMKSTLGIISVGLVITDILQQVMSFSRDYLLTVLSQRLSIDVILSYIRHIFELPMSF
FATRRTGEIISRFTDANSIIDALASTILSLFLDVSILILVEGVLLAQNPNLFLLSLISIPIYMFIIFSFMKPFEKMNHDV
MQSNSMVSSAIIEDINGIETIKSLTSEENRYQNIDSEFVDYLEKSFKLSKYSILQTSLKQGTKLVLNILILWFGA
Nucleotide
Download Length: 708 bp
>NTDB_id=98729 R8624_RS02395 WP_317650242.1 464134..464841(-) (comA/nlmT) [Streptococcus pneumoniae strain PZ900701208]
TTGGTCACTATTATCAATATAGGTGGTTCTTACTATCTCCAAGGAATCTTGGATGAATACATTCCAAATCAGATGAAATC
AACTTTAGGAATCATCTCAGTTGGTCTGGTTATCACCGATATCCTCCAACAAGTCATGAGCTTCTCCAGAGATTATCTCC
TAACCGTTCTGAGTCAGAGATTAAGTATTGATGTGATTTTATCCTATATTCGCCATATTTTTGAACTTCCCATGTCTTTC
TTTGCGACACGTCGTACAGGAGAAATCATTTCACGGTTCACAGATGCTAACTCTATTATAGATGCCTTGGCTTCTACCAT
TCTTTCTCTTTTTCTGGATGTTTCTATTCTGATTCTTGTAGAGGGAGTCTTGCTGGCACAAAACCCTAATCTCTTCCTTC
TTTCTCTTATTTCCATTCCTATATACATGTTCATCATCTTTTCTTTTATGAAGCCTTTCGAAAAAATGAACCATGATGTC
ATGCAAAGTAATTCTATGGTTAGCTCTGCCATTATCGAAGATATCAACGGGATTGAGACTATAAAGTCGCTCACGAGTGA
AGAAAATCGCTATCAAAATATAGACAGCGAATTTGTAGATTATTTGGAAAAATCCTTTAAGCTCAGTAAATATTCTATTT
TACAAACGAGTTTAAAGCAGGGAACAAAATTAGTTCTGAATATCCTTATCCTATGGTTTGGCGCTTAA
TTGGTCACTATTATCAATATAGGTGGTTCTTACTATCTCCAAGGAATCTTGGATGAATACATTCCAAATCAGATGAAATC
AACTTTAGGAATCATCTCAGTTGGTCTGGTTATCACCGATATCCTCCAACAAGTCATGAGCTTCTCCAGAGATTATCTCC
TAACCGTTCTGAGTCAGAGATTAAGTATTGATGTGATTTTATCCTATATTCGCCATATTTTTGAACTTCCCATGTCTTTC
TTTGCGACACGTCGTACAGGAGAAATCATTTCACGGTTCACAGATGCTAACTCTATTATAGATGCCTTGGCTTCTACCAT
TCTTTCTCTTTTTCTGGATGTTTCTATTCTGATTCTTGTAGAGGGAGTCTTGCTGGCACAAAACCCTAATCTCTTCCTTC
TTTCTCTTATTTCCATTCCTATATACATGTTCATCATCTTTTCTTTTATGAAGCCTTTCGAAAAAATGAACCATGATGTC
ATGCAAAGTAATTCTATGGTTAGCTCTGCCATTATCGAAGATATCAACGGGATTGAGACTATAAAGTCGCTCACGAGTGA
AGAAAATCGCTATCAAAATATAGACAGCGAATTTGTAGATTATTTGGAAAAATCCTTTAAGCTCAGTAAATATTCTATTT
TACAAACGAGTTTAAAGCAGGGAACAAAATTAGTTCTGAATATCCTTATCCTATGGTTTGGCGCTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comA/nlmT | Streptococcus mutans UA159 |
74.468 |
100 |
0.745 |
| comA | Streptococcus pneumoniae Rx1 |
68.511 |
100 |
0.685 |
| comA | Streptococcus pneumoniae D39 |
68.511 |
100 |
0.685 |
| comA | Streptococcus pneumoniae R6 |
68.511 |
100 |
0.685 |
| comA | Streptococcus mitis SK321 |
68.511 |
100 |
0.685 |
| comA | Streptococcus mitis NCTC 12261 |
68.511 |
100 |
0.685 |
| comA | Streptococcus pneumoniae TIGR4 |
68.085 |
100 |
0.681 |
| comA | Streptococcus gordonii str. Challis substr. CH1 |
67.66 |
100 |
0.677 |