Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   MHB51_RS06405 Genome accession   NZ_CP152046
Coordinates   1336074..1337315 (-) Length   413 a.a.
NCBI ID   WP_342559250.1    Uniprot ID   -
Organism   Metasolibacillus sp. FSL K6-0083     
Function   unknown (predicted from homology)   
Unclear

Genomic Context

Location: 1331074..1342315
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHB51_RS06385 (MHB51_06385) - 1331422..1331709 (+) 288 WP_066170234.1 RNA polymerase alpha subunit C-terminal domain-containing protein -
  MHB51_RS06390 (MHB51_06390) - 1331737..1332534 (-) 798 WP_342559249.1 TIGR00282 family metallophosphoesterase -
  MHB51_RS06395 (MHB51_06395) rny 1332871..1334433 (-) 1563 WP_066170328.1 ribonuclease Y -
  MHB51_RS06400 (MHB51_06400) recA 1334698..1335765 (-) 1068 WP_107942314.1 recombinase RecA Machinery gene
  MHB51_RS06405 (MHB51_06405) cinA 1336074..1337315 (-) 1242 WP_342559250.1 competence/damage-inducible protein A Machinery gene
  MHB51_RS06410 (MHB51_06410) pgsA 1337331..1337909 (-) 579 WP_066170224.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  MHB51_RS06415 (MHB51_06415) - 1337969..1338847 (-) 879 WP_342559251.1 helix-turn-helix domain-containing protein -
  MHB51_RS06420 (MHB51_06420) - 1338865..1339650 (-) 786 WP_066170218.1 DUF3388 domain-containing protein -
  MHB51_RS06425 (MHB51_06425) - 1340353..1340610 (-) 258 WP_066170215.1 DUF3243 domain-containing protein -
  MHB51_RS06430 (MHB51_06430) - 1340667..1341389 (-) 723 WP_066170213.1 SDR family oxidoreductase -

Sequence

Protein


Download         Length: 413 a.a.        Molecular weight: 44187.40 Da        Isoelectric Point: 4.8911

>NTDB_id=986711 MHB51_RS06405 WP_342559250.1 1336074..1337315(-) (cinA) [Metasolibacillus sp. FSL K6-0083]
MNAEIIAVGSELLLGQIANTNAKFISSQLSELGVNVYYHTVVGDNAARLEEVIAVAEKRANIIVFSGGLGPTKDDLTKET
IARQLGVELAFDETALTYIEAFFERLGRPMTDNNKKQALVLAGSDVLANHHGMAPGMIFERNDKIYILLPGPPKELEPMF
QFEAKPKLAARLTDGAIILSHVMRFYGIGEAELEVAVQHILDNQTNPTVAPLASDGEVTLRITAKADNGQEARRLIEAKA
AEIQAIVGQFQYGINDDSLASKTVEALLANNLTIAAAESLTAGLFQAELAEIPGVSGTLAGGVVTYNEHTKTEQLGIASE
LFAEYGVVSSECAAAMAESVRAKFGTNIGVGLTGAAGPDGHGKQPAGTVWIGISMEGRDVQTYKLQLSGMRNTNRLRAVK
FTCSYLLRLLNEK

Nucleotide


Download         Length: 1242 bp        

>NTDB_id=986711 MHB51_RS06405 WP_342559250.1 1336074..1337315(-) (cinA) [Metasolibacillus sp. FSL K6-0083]
ATGAATGCAGAAATTATTGCAGTTGGCTCAGAGCTCTTACTTGGGCAAATTGCCAATACGAATGCAAAATTTATTTCGAG
CCAGCTATCTGAATTAGGTGTCAATGTTTATTATCATACAGTAGTTGGTGACAATGCTGCTAGACTTGAAGAAGTAATTG
CAGTTGCTGAGAAACGTGCAAATATTATTGTTTTTTCGGGTGGCTTAGGTCCGACAAAGGATGATTTAACAAAGGAAACG
ATTGCGCGTCAATTAGGTGTGGAGTTAGCATTTGATGAAACTGCACTAACGTATATTGAAGCGTTTTTTGAGCGCTTAGG
ACGCCCGATGACAGACAACAATAAGAAGCAAGCGCTTGTATTAGCTGGAAGCGATGTCTTGGCAAATCATCACGGGATGG
CACCCGGTATGATTTTTGAGCGCAATGATAAAATATATATTTTACTACCCGGCCCACCAAAGGAGCTAGAGCCGATGTTC
CAGTTTGAAGCAAAGCCAAAGCTTGCGGCTCGCTTAACAGACGGAGCGATTATCCTTTCACATGTCATGCGCTTTTACGG
TATCGGTGAAGCGGAGTTAGAAGTAGCGGTGCAACATATTTTAGACAATCAAACAAACCCAACTGTCGCACCATTAGCCT
CTGATGGAGAAGTAACATTACGCATTACGGCAAAGGCTGACAATGGGCAGGAGGCACGCAGGCTTATTGAAGCAAAAGCA
GCAGAAATTCAAGCGATTGTTGGTCAGTTCCAATATGGTATAAATGATGATTCACTTGCTTCGAAAACAGTGGAGGCATT
GCTTGCTAATAATTTAACAATTGCTGCGGCTGAAAGCTTAACCGCTGGGTTATTTCAAGCTGAATTAGCTGAAATTCCAG
GTGTAAGTGGAACTTTAGCAGGCGGGGTTGTAACATATAATGAGCATACAAAAACGGAGCAGCTCGGTATTGCTTCTGAG
CTATTCGCCGAATACGGTGTGGTAAGTAGCGAATGTGCGGCAGCAATGGCAGAAAGCGTGCGGGCAAAATTCGGAACAAA
TATTGGTGTAGGCTTAACAGGTGCTGCTGGTCCTGATGGTCATGGTAAACAGCCTGCGGGCACCGTTTGGATAGGCATTA
GTATGGAAGGGCGAGATGTGCAAACATACAAGCTCCAGCTTTCAGGTATGCGCAACACAAATCGTCTAAGAGCAGTTAAA
TTCACATGTAGTTATTTATTACGCCTACTTAATGAAAAATAA

Domains

Predicted by InterproScan.

Competence-damaged protein (CinA)

(257-409)

Probable molybdopterin binding domain (MoCF_biosynth)

(5-168)

Damage-inducible protein CinA KH domain (CinA_KH)

(180-253)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

52.184

99.758

0.521
  cinA Streptococcus mitis SK321

45.974

93.22

0.429
  cinA Streptococcus mitis NCTC 12261

45.714

93.22

0.426
  cinA Streptococcus pneumoniae TIGR4

45.195

93.22

0.421
  cinA Streptococcus pneumoniae Rx1

44.935

93.22

0.419
  cinA Streptococcus pneumoniae R6

44.935

93.22

0.419
  cinA Streptococcus pneumoniae D39

44.675

93.22

0.416
  cinA Streptococcus mutans UA159

44.271

92.978

0.412
  cinA Streptococcus suis isolate S10

40

100

0.402

Multiple sequence alignment