Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   MKY77_RS11100 Genome accession   NZ_CP152003
Coordinates   2195546..2196790 (+) Length   414 a.a.
NCBI ID   WP_339145870.1    Uniprot ID   -
Organism   Sutcliffiella sp. FSL R7-0096     
Function   unknown (predicted from homology)   
Unclear

Genomic Context

Location: 2190546..2201790
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKY77_RS11075 (MKY77_11075) - 2191602..2192318 (+) 717 WP_339145865.1 SDR family oxidoreductase -
  MKY77_RS11080 (MKY77_11080) - 2192388..2192645 (+) 258 WP_339145867.1 DUF3243 domain-containing protein -
  MKY77_RS11085 (MKY77_11085) - 2192925..2193716 (+) 792 WP_339145868.1 DUF3388 domain-containing protein -
  MKY77_RS11090 (MKY77_11090) - 2193739..2194626 (+) 888 WP_339145869.1 RodZ domain-containing protein -
  MKY77_RS11095 (MKY77_11095) pgsA 2194730..2195311 (+) 582 WP_339149790.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  MKY77_RS11100 (MKY77_11100) cinA 2195546..2196790 (+) 1245 WP_339145870.1 competence/damage-inducible protein A Machinery gene
  MKY77_RS11105 (MKY77_11105) recA 2197332..2198372 (+) 1041 WP_237662144.1 recombinase RecA Machinery gene
  MKY77_RS11110 (MKY77_11110) rny 2198675..2200237 (+) 1563 WP_339149791.1 ribonuclease Y -
  MKY77_RS11115 (MKY77_11115) - 2200550..2201344 (+) 795 WP_339149792.1 TIGR00282 family metallophosphoesterase -
  MKY77_RS11120 (MKY77_11120) spoVS 2201492..2201752 (+) 261 WP_009330666.1 stage V sporulation protein SpoVS -

Sequence

Protein


Download         Length: 414 a.a.        Molecular weight: 45269.73 Da        Isoelectric Point: 5.0018

>NTDB_id=984408 MKY77_RS11100 WP_339145870.1 2195546..2196790(+) (cinA) [Sutcliffiella sp. FSL R7-0096]
MIKNAEIIAVGSELLLGQICNSNAQFLSKQLAELGVDVYYHTVVGDNSSRLMDAIKTAKQRSNLLIFTGGLGPTKDDLTK
ETIAKVLDKQLVMDDEAMSNIAAYFKKSKRVMSENNKKQALVLEGSAILANDYGMAPGMALSDGSHTYMLLPGPPKELQP
MFSVYGREYLLEILGVKEQIVSKVLRFFGIGESQLETDILDLIDKQTNPTIAPLAGDNEVTLRLTAKHHSIEEANRLIDQ
SEKEILDRVGEFFFGYDEDTIYSVLFNKIQESKYTLSSAESLTGGLFSERMTSFTGASEVIEGAVVSYTNGVKDNVLGVN
KQTLEKDGAVSEQAAKEMALGVKKLLQTDIGISFTGVAGPGTMDNQPVGTVFIGIALPNDETIVHEIHLAGTRDGIRHRS
AKYGCHYLLKELFK

Nucleotide


Download         Length: 1245 bp        

>NTDB_id=984408 MKY77_RS11100 WP_339145870.1 2195546..2196790(+) (cinA) [Sutcliffiella sp. FSL R7-0096]
ATGATTAAAAACGCAGAGATTATTGCTGTAGGTTCTGAATTGCTGCTCGGGCAAATTTGTAATTCGAATGCACAATTTCT
TTCAAAACAGCTTGCCGAACTTGGGGTGGACGTGTATTACCACACTGTAGTGGGAGATAATTCTTCAAGATTGATGGATG
CTATCAAAACAGCCAAACAACGTTCCAATCTCTTGATCTTCACTGGAGGTCTTGGACCAACGAAAGACGACCTAACCAAA
GAAACGATTGCAAAAGTGTTAGACAAACAATTGGTAATGGATGATGAAGCAATGTCCAACATAGCAGCTTACTTCAAGAA
ATCAAAGCGAGTGATGAGCGAAAATAATAAAAAGCAAGCTCTCGTATTGGAGGGCTCTGCCATCTTGGCGAATGATTATG
GAATGGCTCCGGGAATGGCGCTTAGTGACGGGTCTCATACTTATATGCTATTACCTGGCCCTCCCAAAGAGCTCCAACCG
ATGTTCTCCGTTTATGGAAGAGAGTACCTGCTAGAAATTCTAGGTGTAAAAGAACAGATTGTTTCCAAGGTTCTCCGTTT
TTTCGGGATTGGCGAGTCCCAGCTTGAAACGGATATTTTAGACCTCATAGACAAGCAGACTAATCCTACTATCGCACCGC
TTGCAGGGGACAACGAGGTGACATTAAGACTTACAGCAAAGCATCATTCCATCGAGGAGGCTAACCGTCTTATTGATCAA
TCCGAAAAGGAGATCTTGGATCGAGTCGGTGAATTCTTCTTTGGATACGATGAAGATACCATCTACTCTGTTCTATTTAA
TAAAATCCAAGAGTCCAAGTACACACTAAGCAGTGCAGAGAGCCTGACTGGAGGGTTATTCTCTGAAAGGATGACAAGCT
TCACTGGTGCCTCTGAAGTAATAGAAGGTGCTGTTGTCAGCTATACCAATGGTGTAAAGGATAATGTGCTCGGCGTTAAC
AAACAAACACTTGAAAAAGATGGAGCGGTAAGTGAGCAGGCTGCAAAAGAAATGGCACTTGGAGTGAAGAAATTACTGCA
AACGGATATCGGTATCAGTTTCACTGGGGTTGCAGGTCCAGGAACAATGGATAATCAACCTGTCGGCACAGTGTTTATCG
GAATAGCTCTACCAAATGATGAAACCATCGTTCATGAAATCCATTTAGCAGGGACGAGAGATGGCATAAGACATAGATCA
GCAAAATATGGCTGTCACTATCTATTGAAAGAATTGTTCAAGTAG

Domains

Predicted by InterproScan.

Damage-inducible protein CinA KH domain (CinA_KH)

(182-255)

Competence-damaged protein (CinA)

(261-411)

Probable molybdopterin binding domain (MoCF_biosynth)

(7-169)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

61.463

99.034

0.609
  cinA Streptococcus pneumoniae TIGR4

45.107

100

0.457
  cinA Streptococcus pneumoniae Rx1

45.107

100

0.457
  cinA Streptococcus pneumoniae R6

45.107

100

0.457
  cinA Streptococcus mitis NCTC 12261

44.869

100

0.454
  cinA Streptococcus pneumoniae D39

44.869

100

0.454
  cinA Streptococcus mitis SK321

44.391

100

0.449
  cinA Streptococcus mutans UA159

44.5

96.618

0.43
  cinA Streptococcus suis isolate S10

41.053

91.787

0.377

Multiple sequence alignment