Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   NSQ25_RS06660 Genome accession   NZ_CP151982
Coordinates   1314349..1314810 (-) Length   153 a.a.
NCBI ID   WP_008356877.1    Uniprot ID   -
Organism   Bacillus sp. FSL R5-0512     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1309349..1319810
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSQ25_RS06635 (NSQ25_06635) - 1309952..1310836 (+) 885 WP_326136494.1 cation diffusion facilitator family transporter -
  NSQ25_RS06640 (NSQ25_06640) - 1310901..1311053 (-) 153 WP_162842519.1 hypothetical protein -
  NSQ25_RS06645 (NSQ25_06645) - 1311356..1311895 (+) 540 WP_081124325.1 RDD family protein -
  NSQ25_RS06650 (NSQ25_06650) - 1312020..1313330 (+) 1311 WP_034281575.1 MFS transporter -
  NSQ25_RS06655 (NSQ25_06655) - 1313404..1314312 (+) 909 WP_024424709.1 chemotaxis protein -
  NSQ25_RS06660 (NSQ25_06660) kre 1314349..1314810 (-) 462 WP_008356877.1 YkyB family protein Regulator
  NSQ25_RS06665 (NSQ25_06665) - 1314974..1315144 (-) 171 Protein_1258 site-specific integrase -
  NSQ25_RS06670 (NSQ25_06670) - 1315322..1315498 (+) 177 WP_169737552.1 hypothetical protein -
  NSQ25_RS06675 (NSQ25_06675) - 1315625..1316542 (-) 918 WP_305933630.1 AraC family transcriptional regulator -
  NSQ25_RS06680 (NSQ25_06680) - 1316656..1317567 (+) 912 WP_326136493.1 EamA family transporter -
  NSQ25_RS06685 (NSQ25_06685) - 1317704..1317919 (-) 216 WP_024424712.1 hypothetical protein -
  NSQ25_RS06690 (NSQ25_06690) - 1318179..1319456 (-) 1278 WP_034281582.1 MFS transporter -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17711.30 Da        Isoelectric Point: 10.2452

>NTDB_id=983302 NSQ25_RS06660 WP_008356877.1 1314349..1314810(-) (kre) [Bacillus sp. FSL R5-0512]
MDDYAHTKDIEPTAENIAKAIYTVNRHAKTAPNPKFLYLLKKRALQKLLQEGKGRKVGLHFSNNPKYSQQQSDVLIEIGD
YYFHLPPTKEDFEFLPHLGNLNQSYRNPKANMSLNRAKQILQTYVGLKEKPAATKQKSHYTKPVFKRLGESYF

Nucleotide


Download         Length: 462 bp        

>NTDB_id=983302 NSQ25_RS06660 WP_008356877.1 1314349..1314810(-) (kre) [Bacillus sp. FSL R5-0512]
ATGGACGATTATGCTCATACTAAAGACATAGAACCTACAGCAGAAAACATCGCAAAAGCCATTTATACTGTTAACCGCCA
TGCTAAAACCGCACCAAACCCCAAGTTTCTTTATCTTTTGAAAAAACGCGCGCTGCAAAAACTATTGCAAGAAGGTAAAG
GAAGAAAAGTGGGCCTACATTTCTCTAACAATCCCAAGTATAGTCAACAACAGTCCGACGTGCTGATTGAAATTGGAGAT
TATTATTTTCACCTGCCACCAACGAAAGAAGACTTCGAATTTTTGCCACACTTAGGAAATTTAAATCAATCATATCGCAA
TCCGAAAGCGAATATGTCATTAAACCGAGCAAAGCAAATACTTCAAACGTATGTCGGTTTAAAAGAAAAACCTGCCGCCA
CAAAACAAAAATCACATTACACAAAGCCCGTCTTCAAACGTCTCGGGGAAAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

75.974

100

0.765

Multiple sequence alignment