Detailed information    

insolico Bioinformatically predicted

Overview


Name   stkP   Type   Regulator
Locus tag   ACNM7T_RS08230 Genome accession   NZ_CP183041
Coordinates   1616345..1618288 (+) Length   647 a.a.
NCBI ID   WP_012117534.1    Uniprot ID   A7Z4J7
Organism   Bacillus amyloliquefaciens strain Scm     
Function   require for competence development; phosphorylate ComE (predicted from homology)   
Competence regulation

Genomic Context


Location: 1611345..1623288
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACNM7T_RS08205 (ACNM7T_08205) def 1611719..1612201 (+) 483 WP_100001423.1 peptide deformylase -
  ACNM7T_RS08210 (ACNM7T_08210) fmt 1612206..1613159 (+) 954 WP_100001425.1 methionyl-tRNA formyltransferase -
  ACNM7T_RS08215 (ACNM7T_08215) rsmB 1613146..1614489 (+) 1344 WP_100001427.1 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB -
  ACNM7T_RS08220 (ACNM7T_08220) rlmN 1614493..1615584 (+) 1092 WP_003154339.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  ACNM7T_RS08225 (ACNM7T_08225) - 1615590..1616351 (+) 762 WP_007409750.1 Stp1/IreP family PP2C-type Ser/Thr phosphatase -
  ACNM7T_RS08230 (ACNM7T_08230) stkP 1616345..1618288 (+) 1944 WP_012117534.1 Stk1 family PASTA domain-containing Ser/Thr kinase Regulator
  ACNM7T_RS08235 (ACNM7T_08235) rsgA 1618303..1619193 (+) 891 WP_100001429.1 ribosome small subunit-dependent GTPase A -
  ACNM7T_RS08240 (ACNM7T_08240) rpe 1619195..1619845 (+) 651 WP_100001431.1 ribulose-phosphate 3-epimerase -
  ACNM7T_RS08245 (ACNM7T_08245) - 1619914..1620558 (+) 645 WP_100001433.1 thiamine diphosphokinase -
  ACNM7T_RS08250 (ACNM7T_08250) spoVM 1620645..1620725 (+) 81 WP_003154329.1 stage V sporulation protein SpoVM -
  ACNM7T_RS08255 (ACNM7T_08255) rpmB 1620803..1620991 (-) 189 WP_003154328.1 50S ribosomal protein L28 -
  ACNM7T_RS08260 (ACNM7T_08260) - 1621250..1621612 (+) 363 WP_003154327.1 Asp23/Gls24 family envelope stress response protein -

Sequence


Protein


Download         Length: 647 a.a.        Molecular weight: 71694.28 Da        Isoelectric Point: 5.0248

>NTDB_id=981558 ACNM7T_RS08230 WP_012117534.1 1616345..1618288(+) (stkP) [Bacillus amyloliquefaciens strain Scm]
MLTGKRISGRYHILRPIGGGGMANVFLAEDIILEREVAIKILRFDFVNDIDFIRRFRREAQSASSLDHPNIVSIYDIGEE
GDIYYIVMEYVEGMTLKEYINAHGPLHPKEALSVMEQIVSAIAHAHQNHIVHRDIKPHNILIDHLGHIKVTDFGIATALT
STTITHTNSVLGSVHYLSPEQARGGLATKKSDIYALGIVLFELLTGKIPFDGESAVSIALKHLQTETPSARKWNPSIPQS
VENIILKATAKDPFHRYESAEDMEADIRTAFDAGRLNEQKFSVQDDEEMTKAIPVITDGAKAAPQAETPGETDDKEQQPA
KKKKRKWPWVLLAVCFIFIMAAVLAVTVFPSLFMPKDVSVPDVRGMKYEKAEALLEKNGLRADPDITDIEDEKIEEELMV
KTDPKAGSTVKEGSSVKLYKSIGKPKTQLIDVKGRQIGDAKKALKEKGFKHVNVKEENDDSEAGTVIDQNPSAGTDMVAS
DDEVNLTVSLGPADVTLRDLKTYSKEAASGYLEDNGLQLVEKQAHSDDVPEGQVMKQEPAAGTAVKPGSNVEVTFSLGPE
EKPAKTVKEKISIPYEPEHEGDELEVQIAIDDKDHSISDTYDSFKIKEPTEKTIELKIDQGQKGYYQVMVDHKVVSYKTI
EYPKDND

Nucleotide


Download         Length: 1944 bp        

>NTDB_id=981558 ACNM7T_RS08230 WP_012117534.1 1616345..1618288(+) (stkP) [Bacillus amyloliquefaciens strain Scm]
GTGCTAACCGGCAAGCGGATCAGCGGGCGTTATCATATCCTCCGGCCCATTGGCGGCGGCGGAATGGCAAACGTTTTTTT
AGCTGAGGACATCATTCTCGAACGTGAAGTCGCAATTAAAATTCTGCGGTTTGACTTTGTGAATGACATTGATTTTATCA
GGCGTTTCAGAAGAGAAGCACAGTCGGCATCAAGCCTCGATCATCCGAATATCGTCAGTATTTACGATATCGGGGAGGAA
GGCGATATTTATTACATTGTCATGGAATATGTGGAAGGCATGACATTAAAGGAATACATAAACGCACACGGACCGCTTCA
TCCGAAAGAAGCGCTGTCCGTTATGGAGCAGATCGTCTCGGCCATCGCCCATGCCCATCAAAACCATATCGTGCACCGGG
ATATTAAACCGCACAATATATTGATAGATCATTTAGGGCATATCAAGGTGACGGATTTCGGCATCGCCACAGCGCTTACG
TCTACGACAATCACACATACGAATTCTGTGCTGGGCTCGGTTCATTATTTGTCTCCGGAGCAGGCGAGAGGCGGTCTGGC
AACGAAAAAATCAGATATTTACGCGCTCGGCATCGTGCTGTTTGAGCTTTTAACAGGTAAAATCCCTTTTGACGGAGAAT
CAGCCGTCAGCATAGCGCTAAAGCATCTGCAAACAGAAACGCCTTCCGCCAGAAAGTGGAACCCTTCCATTCCGCAGAGC
GTCGAAAACATTATTTTAAAGGCAACCGCTAAAGACCCGTTTCACCGCTATGAAAGCGCCGAGGACATGGAAGCGGACAT
CAGAACGGCTTTTGACGCCGGCAGGCTGAATGAACAAAAATTTTCCGTGCAGGATGATGAGGAAATGACAAAAGCCATTC
CCGTTATTACTGACGGCGCAAAAGCCGCACCTCAGGCGGAAACGCCGGGGGAGACGGATGATAAGGAACAGCAGCCCGCC
AAAAAGAAAAAACGGAAATGGCCGTGGGTTTTGCTGGCCGTCTGTTTCATTTTCATTATGGCGGCTGTTCTTGCGGTCAC
CGTGTTCCCGTCTTTGTTTATGCCTAAAGATGTAAGCGTCCCCGACGTACGGGGCATGAAGTACGAAAAAGCGGAAGCCC
TGCTTGAAAAGAACGGGCTCCGGGCGGATCCTGATATAACGGATATTGAAGATGAAAAAATAGAAGAGGAATTAATGGTC
AAAACGGACCCAAAAGCGGGGTCTACCGTTAAAGAAGGCTCTTCTGTAAAACTGTACAAAAGCATCGGAAAACCGAAAAC
CCAGCTGATCGACGTGAAAGGGCGGCAGATCGGCGACGCAAAAAAAGCGCTGAAGGAAAAAGGCTTCAAACATGTCAATG
TCAAAGAAGAGAACGATGACAGCGAGGCCGGCACCGTAATTGATCAGAACCCGTCAGCCGGCACCGACATGGTCGCAAGC
GACGATGAAGTCAATCTAACGGTCAGCCTCGGCCCGGCGGACGTTACGCTGAGGGACTTAAAGACTTACAGCAAAGAAGC
GGCTTCAGGGTATCTTGAAGATAACGGCCTGCAGCTTGTTGAAAAACAAGCCCATTCAGATGACGTGCCGGAAGGACAAG
TCATGAAGCAAGAGCCGGCAGCCGGCACTGCGGTTAAGCCGGGAAGTAATGTTGAAGTGACGTTCTCGCTCGGACCTGAA
GAAAAACCGGCGAAAACGGTAAAAGAAAAAATCAGCATTCCTTACGAACCCGAACATGAAGGGGACGAGCTTGAAGTGCA
AATCGCCATCGATGATAAGGACCACAGCATCTCTGATACGTATGACTCATTTAAAATAAAAGAGCCGACTGAAAAAACAA
TCGAACTGAAGATTGATCAGGGACAGAAGGGGTATTATCAAGTGATGGTCGATCATAAAGTCGTCAGCTACAAAACGATT
GAATACCCGAAAGATAATGACTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A7Z4J7

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  stkP Streptococcus pneumoniae TIGR4

38.799

95.209

0.369

  stkP Streptococcus pneumoniae D39

38.636

95.209

0.368

  stkP Streptococcus pneumoniae R6

38.636

95.209

0.368

  stkP Streptococcus pneumoniae Rx1

38.474

95.209

0.366

  pknB Streptococcus mutans UA159

40.838

88.563

0.362


Multiple sequence alignment