Detailed information NTG0971672

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: ACK1X7_RS17860
• Genome accession: NZ_CP178393
• Coordinates: 4103546..4104202 (-)
• Length: 218 a.a.
• NCBI ID: WP_385142128.1
• Uniprot ID: -
• Organism: Streptomyces sp. CY1
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 4098546..4109202

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACK1X7_RS17840 (ACK1X7_17790)	-	4099071..4100036 (+)	966	WP_390793198.1	hypothetical protein	-
ACK1X7_RS17845 (ACK1X7_17795)	-	4100090..4101070 (+)	981	WP_385142134.1	hypothetical protein	-
ACK1X7_RS17850 (ACK1X7_17800)	-	4101129..4101971 (+)	843	WP_390793197.1	hypothetical protein	-
ACK1X7_RS17855 (ACK1X7_17805)	clpX	4102077..4103363 (-)	1287	WP_059145704.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
ACK1X7_RS17860 (ACK1X7_17810)	clpP	4103546..4104202 (-)	657	WP_385142128.1	ATP-dependent Clp protease proteolytic subunit	Regulator
ACK1X7_RS17865 (ACK1X7_17815)	clpP	4104265..4104879 (-)	615	WP_161561328.1	ATP-dependent Clp protease proteolytic subunit	Regulator
ACK1X7_RS17870 (ACK1X7_17820)	tig	4105159..4106589 (-)	1431	WP_385142125.1	trigger factor	-
ACK1X7_RS17885 (ACK1X7_17835)	-	4107196..4107390 (-)	195	WP_078641423.1	hypothetical protein	-
ACK1X7_RS17890 (ACK1X7_17840)	-	4108006..4109190 (+)	1185	WP_390793196.1	acyltransferase family protein	-

Sequence

Protein

• Length: 218 a.a.
• Molecular weight: 23908.27 Da
• Isoelectric Point: 4.5997

>NTDB_id=971672 ACK1X7_RS17860 WP_385142128.1 4103546..4104202(-) (clpP) [Streptomyces sp. CY1]
MSNFPGSGLYNGPMAESRYVVPRFVERTSQGIREYDPYAKLFEERVIFLGVQIDDASANDVMAQLLCLESMDPDRDISVY
INSPGGSFTALTAIYDTMQFVKPDIQTVCMGQAASAAAVLLAAGTPGKRMALPNARILIHQPYSETGRGQVSDLEIAANE
ILRMRAQLEEMLAKHSTTPIEKIRDDIERDKILTAEESLAYGLVDQIVSTRKTSVGLG

Nucleotide

• Length: 657 bp

>NTDB_id=971672 ACK1X7_RS17860 WP_385142128.1 4103546..4104202(-) (clpP) [Streptomyces sp. CY1]
ATGAGCAACTTCCCCGGCAGCGGCCTGTACAACGGCCCGATGGCCGAATCCCGCTATGTCGTTCCGCGTTTCGTCGAGCG
CACCTCCCAGGGCATCCGCGAGTACGACCCGTACGCGAAGCTCTTCGAGGAGCGCGTGATCTTCCTGGGCGTCCAGATCG
ACGACGCCTCGGCCAACGACGTGATGGCGCAGCTTCTGTGCCTGGAGTCGATGGACCCGGACCGTGACATTTCGGTCTAC
ATCAACTCTCCCGGCGGCTCGTTCACCGCGCTGACCGCCATCTACGACACGATGCAGTTCGTCAAGCCCGACATCCAGAC
GGTCTGCATGGGCCAGGCGGCGTCCGCCGCGGCCGTGCTGCTCGCCGCCGGTACGCCGGGCAAGCGGATGGCCCTGCCCA
ATGCCCGCATCCTGATCCACCAGCCGTACAGTGAGACCGGGCGTGGTCAGGTCTCCGACCTGGAGATCGCGGCCAACGAG
ATCCTGCGGATGCGCGCGCAGCTCGAGGAGATGCTGGCCAAGCACTCCACCACGCCCATCGAGAAGATCCGCGACGATAT
CGAGCGGGACAAGATCCTCACGGCCGAGGAGTCCCTGGCGTACGGTCTTGTCGACCAGATCGTTTCCACCCGCAAGACGT
CGGTCGGTCTCGGCTGA

Domains

Predicted by InterProScan.

• Clp protease (CLP_protease) (30-210)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	50.526	87.156	0.44
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.936	86.239	0.422
clpP	Streptococcus thermophilus LMD-9	45.361	88.991	0.404
clpP	Streptococcus pyogenes JRS4	45.361	88.991	0.404
clpP	Streptococcus pyogenes MGAS315	45.361	88.991	0.404
clpP	Streptococcus thermophilus LMG 18311	45.361	88.991	0.404
clpP	Streptococcus mutans UA159	44	91.743	0.404
clpP	Lactococcus lactis subsp. cremoris KW2	45.55	87.615	0.399
clpP	Streptococcus pneumoniae R6	44.56	88.532	0.394
clpP	Streptococcus pneumoniae TIGR4	44.56	88.532	0.394
clpP	Streptococcus pneumoniae D39	44.56	88.532	0.394
clpP	Streptococcus pneumoniae Rx1	44.56	88.532	0.394
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	44.503	87.615	0.39